Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.71■□□□□ 0.59
Trim33Q99PP7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.71■□□□□ 0.59
Trim33Q99PP7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim33Q99PP7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim33Q99PP7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim33Q99PP7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim33Q99PP7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim33Q99PP7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim33Q99PP7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.68■□□□□ 0.58
Trim33Q99PP7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.68■□□□□ 0.58
Trim33Q99PP7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Trim33Q99PP7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim33Q99PP7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim33Q99PP7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.66■□□□□ 0.58
Trim33Q99PP7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim33Q99PP7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim33Q99PP7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim33Q99PP7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim33Q99PP7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.65■□□□□ 0.58
Trim33Q99PP7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim33Q99PP7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.65■□□□□ 0.58
Trim33Q99PP7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim33Q99PP7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim33Q99PP7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim33Q99PP7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim33Q99PP7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim33Q99PP7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim33Q99PP7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 142.4 ms