Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap2Q8VC34 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Gm13146-201ENSMUST00000118508 780 ntBASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Gm13234-201ENSMUST00000120010 747 ntBASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.84■□□□□ 0.93
Rpap2Q8VC34 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.84■□□□□ 0.93
Rpap2Q8VC34 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap2Q8VC34 Iqck-206ENSMUST00000208658 2891 ntBASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap2Q8VC34 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpap2Q8VC34 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpap2Q8VC34 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rpap2Q8VC34 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap2Q8VC34 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Gm42778-201ENSMUST00000199644 553 ntBASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap2Q8VC34 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpap2Q8VC34 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpap2Q8VC34 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rpap2Q8VC34 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rpap2Q8VC34 Gm5874-201ENSMUST00000096101 508 ntBASIC20.79■□□□□ 0.92
Rpap2Q8VC34 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpap2Q8VC34 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpap2Q8VC34 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Gm18284-201ENSMUST00000172604 624 ntBASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Rpap2Q8VC34 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms