Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Tnfrsf1aP25118 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Gm12251-201ENSMUST00000117893 792 ntBASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1aP25118 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf1aP25118 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Gm8493-201ENSMUST00000196881 489 ntBASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.84■□□□□ 0.13
Tnfrsf1aP25118 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.83■□□□□ 0.13
Tnfrsf1aP25118 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf1aP25118 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Gm11421-201ENSMUST00000122124 294 ntBASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf1aP25118 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Tnfrsf1aP25118 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms