Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC16.45■□□□□ 0.22
Dkk1O54908 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC16.45■□□□□ 0.22
Dkk1O54908 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Dkk1O54908 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dkk1O54908 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dkk1O54908 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.44■□□□□ 0.22
Dkk1O54908 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dkk1O54908 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dkk1O54908 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Dkk1O54908 Gm12467-201ENSMUST00000117625 745 ntBASIC16.44■□□□□ 0.22
Dkk1O54908 Gm21147-201ENSMUST00000186046 913 ntBASIC16.44■□□□□ 0.22
Dkk1O54908 Gm37002-201ENSMUST00000194560 373 ntBASIC16.44■□□□□ 0.22
Dkk1O54908 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dkk1O54908 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dkk1O54908 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Dkk1O54908 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dkk1O54908 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Dkk1O54908 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Dkk1O54908 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dkk1O54908 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Dkk1O54908 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Dkk1O54908 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dkk1O54908 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Dkk1O54908 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Dkk1O54908 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.43■□□□□ 0.22
Dkk1O54908 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Dkk1O54908 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dkk1O54908 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dkk1O54908 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Dkk1O54908 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.42■□□□□ 0.22
Dkk1O54908 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.42■□□□□ 0.22
Dkk1O54908 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Gm7860-201ENSMUST00000121190 879 ntBASIC16.42■□□□□ 0.22
Dkk1O54908 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Dkk1O54908 Gm18284-201ENSMUST00000172604 624 ntBASIC16.42■□□□□ 0.22
Dkk1O54908 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Dkk1O54908 Gm44387-201ENSMUST00000196298 145 ntBASIC16.42■□□□□ 0.22
Dkk1O54908 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.42■□□□□ 0.22
Dkk1O54908 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Dkk1O54908 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Dkk1O54908 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Dkk1O54908 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Dkk1O54908 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Dkk1O54908 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Dkk1O54908 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dkk1O54908 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Dkk1O54908 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dkk1O54908 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dkk1O54908 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.41■□□□□ 0.22
Dkk1O54908 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dkk1O54908 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dkk1O54908 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dkk1O54908 Gm18351-201ENSMUST00000188646 883 ntBASIC16.41■□□□□ 0.22
Dkk1O54908 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.41■□□□□ 0.22
Dkk1O54908 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dkk1O54908 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC16.41■□□□□ 0.22
Dkk1O54908 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Dkk1O54908 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Dkk1O54908 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Dkk1O54908 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.4■□□□□ 0.22
Dkk1O54908 Gm38216-201ENSMUST00000194872 1214 ntBASIC16.4■□□□□ 0.22
Dkk1O54908 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Dkk1O54908 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.4■□□□□ 0.22
Dkk1O54908 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Dkk1O54908 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Dkk1O54908 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
Dkk1O54908 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dkk1O54908 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC16.4■□□□□ 0.22
Dkk1O54908 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms