Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hps1O08983 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Hps1O08983 Mir7075-201ENSMUST00000184187 82 ntBASIC17.51■□□□□ 0.39
Hps1O08983 Gm43137-201ENSMUST00000198052 594 ntBASIC17.51■□□□□ 0.39
Hps1O08983 Gm43017-201ENSMUST00000198296 752 ntBASIC17.51■□□□□ 0.39
Hps1O08983 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
Hps1O08983 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hps1O08983 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.5■□□□□ 0.39
Hps1O08983 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps1O08983 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hps1O08983 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.49■□□□□ 0.39
Hps1O08983 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hps1O08983 Mir6236-201ENSMUST00000184437 123 ntBASIC17.49■□□□□ 0.39
Hps1O08983 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hps1O08983 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps1O08983 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.48■□□□□ 0.39
Hps1O08983 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hps1O08983 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps1O08983 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.47■□□□□ 0.39
Hps1O08983 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hps1O08983 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps1O08983 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.47■□□□□ 0.39
Hps1O08983 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hps1O08983 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hps1O08983 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hps1O08983 Gm8493-201ENSMUST00000196881 489 ntBASIC17.46■□□□□ 0.39
Hps1O08983 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hps1O08983 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hps1O08983 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hps1O08983 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hps1O08983 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hps1O08983 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hps1O08983 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Hps1O08983 Golph3-205ENSMUST00000228671 2842 ntBASIC17.45■□□□□ 0.38
Hps1O08983 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hps1O08983 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hps1O08983 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.45■□□□□ 0.38
Hps1O08983 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hps1O08983 Gm9870-201ENSMUST00000063874 645 ntBASIC17.45■□□□□ 0.38
Hps1O08983 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hps1O08983 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hps1O08983 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hps1O08983 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hps1O08983 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hps1O08983 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.44■□□□□ 0.38
Hps1O08983 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms