Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
4933424G06RikA0A140LIP3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Notumos-201ENSMUST00000151998 2659 ntBASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.37■□□□□ 0.69
4933424G06RikA0A140LIP3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
4933424G06RikA0A140LIP3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
4933424G06RikA0A140LIP3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm6211-202ENSMUST00000167849 925 ntBASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.34■□□□□ 0.69
4933424G06RikA0A140LIP3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
4933424G06RikA0A140LIP3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
4933424G06RikA0A140LIP3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
4933424G06RikA0A140LIP3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
4933424G06RikA0A140LIP3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
4933424G06RikA0A140LIP3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.33■□□□□ 0.68
4933424G06RikA0A140LIP3 Gm4968-201ENSMUST00000071458 858 ntBASIC19.33■□□□□ 0.68
4933424G06RikA0A140LIP3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
4933424G06RikA0A140LIP3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
4933424G06RikA0A140LIP3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4933424G06RikA0A140LIP3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
4933424G06RikA0A140LIP3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms