Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv1A0A0B4J1G7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv1A0A0B4J1G7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv1A0A0B4J1G7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv1A0A0B4J1G7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv1A0A0B4J1G7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv1A0A0B4J1G7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv1A0A0B4J1G7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv1A0A0B4J1G7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Gm43530-201ENSMUST00000195920 274 ntBASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv1A0A0B4J1G7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms