Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim33Q99PP7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim33Q99PP7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim33Q99PP7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim33Q99PP7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim33Q99PP7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim33Q99PP7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim33Q99PP7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim33Q99PP7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim33Q99PP7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim33Q99PP7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trim33Q99PP7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim33Q99PP7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.76■□□□□ 0.59
Trim33Q99PP7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim33Q99PP7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim33Q99PP7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim33Q99PP7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim33Q99PP7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.73■□□□□ 0.59
Trim33Q99PP7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim33Q99PP7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim33Q99PP7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.72■□□□□ 0.59
Trim33Q99PP7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim33Q99PP7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim33Q99PP7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms