Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Q8VDP2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Q8VDP2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.53■□□□□ 0.56
Q8VDP2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8VDP2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Q8VDP2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8VDP2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8VDP2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8VDP2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Q8VDP2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.51■□□□□ 0.55
Q8VDP2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Gm14523-201ENSMUST00000117260 558 ntBASIC18.51■□□□□ 0.55
Q8VDP2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.51■□□□□ 0.55
Q8VDP2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8VDP2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Q8VDP2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.5■□□□□ 0.55
Q8VDP2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Terc-201ENSMUST00000082862 423 ntBASIC18.5■□□□□ 0.55
Q8VDP2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8VDP2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Q8VDP2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8VDP2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Q8VDP2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8VDP2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8VDP2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Q8VDP2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Q8VDP2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Q8VDP2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Q8VDP2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.48■□□□□ 0.55
Q8VDP2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.48■□□□□ 0.55
Q8VDP2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Q8VDP2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Q8VDP2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.48■□□□□ 0.55
Q8VDP2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.48■□□□□ 0.55
Q8VDP2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8VDP2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8VDP2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8VDP2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Q8VDP2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.47■□□□□ 0.55
Q8VDP2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8VDP2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8VDP2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Q8VDP2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8VDP2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8VDP2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Q8VDP2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Q8VDP2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.46■□□□□ 0.55
Q8VDP2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.46■□□□□ 0.55
Q8VDP2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms