Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Rpap1Q80TE0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Rpap1Q80TE0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC29.86■■■□□ 2.37
Rpap1Q80TE0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rpap1Q80TE0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rpap1Q80TE0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Rpap1Q80TE0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rpap1Q80TE0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rpap1Q80TE0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Gm37055-201ENSMUST00000191866 133 ntBASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Gm44549-201ENSMUST00000208351 577 ntBASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rpap1Q80TE0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rpap1Q80TE0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rpap1Q80TE0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rpap1Q80TE0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rpap1Q80TE0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
Rpap1Q80TE0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC29.83■■■□□ 2.37
Rpap1Q80TE0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rpap1Q80TE0 Gm2399-201ENSMUST00000104944 225 ntBASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rpap1Q80TE0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
Rpap1Q80TE0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Rpap1Q80TE0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Gm18666-201ENSMUST00000190039 958 ntBASIC29.8■■■□□ 2.36
Rpap1Q80TE0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Rpap1Q80TE0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Rpap1Q80TE0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rpap1Q80TE0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rpap1Q80TE0 Nrn1-203ENSMUST00000223611 1443 ntBASIC29.79■■■□□ 2.36
Rpap1Q80TE0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rpap1Q80TE0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Rpap1Q80TE0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Rpap1Q80TE0 Gm38160-201ENSMUST00000193090 2499 ntBASIC29.78■■■□□ 2.36
Rpap1Q80TE0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC29.78■■■□□ 2.36
Rpap1Q80TE0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Rpap1Q80TE0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Rpap1Q80TE0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rpap1Q80TE0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC29.76■■■□□ 2.35
Rpap1Q80TE0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC29.76■■■□□ 2.35
Rpap1Q80TE0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Rpap1Q80TE0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Rpap1Q80TE0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rpap1Q80TE0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rpap1Q80TE0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Gm20100-201ENSMUST00000209418 2272 ntBASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpap1Q80TE0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 193.7 ms