Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Zfp131-205ENSMUST00000223812 663 ntBASIC15.82■□□□□ 0.12
Trim63Q38HM4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.82■□□□□ 0.12
Trim63Q38HM4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim63Q38HM4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trim63Q38HM4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.81■□□□□ 0.12
Trim63Q38HM4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim63Q38HM4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim63Q38HM4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.79■□□□□ 0.12
Trim63Q38HM4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Trim63Q38HM4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim63Q38HM4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.78■□□□□ 0.12
Trim63Q38HM4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim63Q38HM4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim63Q38HM4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim63Q38HM4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim63Q38HM4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim63Q38HM4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim63Q38HM4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim63Q38HM4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim63Q38HM4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim63Q38HM4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.77■□□□□ 0.11
Trim63Q38HM4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim63Q38HM4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim63Q38HM4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim63Q38HM4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.77■□□□□ 0.11
Trim63Q38HM4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.77■□□□□ 0.11
Trim63Q38HM4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim63Q38HM4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.76■□□□□ 0.11
Trim63Q38HM4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.76■□□□□ 0.11
Trim63Q38HM4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim63Q38HM4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms