Protein–RNA interactions for Protein: E0CX42

Gm4491, Predicted gene 4491, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4491E0CX42 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 AA386476-201ENSMUST00000098781 1665 ntBASIC10.36□□□□□ -0.75
Gm4491E0CX42 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm4491E0CX42 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Gm15820-201ENSMUST00000201566 728 ntBASIC10.35□□□□□ -0.75
Gm4491E0CX42 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Gm4491E0CX42 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm4491E0CX42 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm4491E0CX42 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm4491E0CX42 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Gm4491E0CX42 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC10.34□□□□□ -0.75
Gm4491E0CX42 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm4491E0CX42 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC10.33□□□□□ -0.76
Gm4491E0CX42 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Gm7417-201ENSMUST00000192950 473 ntBASIC10.33□□□□□ -0.76
Gm4491E0CX42 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm4491E0CX42 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Gm43231-201ENSMUST00000202960 2258 ntBASIC10.32□□□□□ -0.76
Gm4491E0CX42 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC10.32□□□□□ -0.76
Gm4491E0CX42 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms