Protein–RNA interactions for Protein: A0A140LI04

Gm5890, Predicted gene 5890, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5890A0A140LI04 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm5890A0A140LI04 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5890A0A140LI04 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5890A0A140LI04 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm5890A0A140LI04 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5890A0A140LI04 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm5890A0A140LI04 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm5890A0A140LI04 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.49■□□□□ 0.07
Gm5890A0A140LI04 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm5890A0A140LI04 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm5890A0A140LI04 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm5890A0A140LI04 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm5890A0A140LI04 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms