Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a4Q9QZR9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.55■□□□□ 0.72
Col4a4Q9QZR9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.54■□□□□ 0.72
Col4a4Q9QZR9 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.54■□□□□ 0.72
Col4a4Q9QZR9 Gm27741-201ENSMUST00000185060 237 ntBASIC19.54■□□□□ 0.72
Col4a4Q9QZR9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col4a4Q9QZR9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a4Q9QZR9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Col4a4Q9QZR9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a4Q9QZR9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a4Q9QZR9 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col4a4Q9QZR9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 Gm21362-201ENSMUST00000194272 928 ntBASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a4Q9QZR9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a4Q9QZR9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a4Q9QZR9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Gm7889-201ENSMUST00000185591 958 ntBASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a4Q9QZR9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Col4a4Q9QZR9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a4Q9QZR9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a4Q9QZR9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.48■□□□□ 0.71
Col4a4Q9QZR9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a4Q9QZR9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Col4a4Q9QZR9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.47■□□□□ 0.71
Col4a4Q9QZR9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a4Q9QZR9 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.47■□□□□ 0.71
Col4a4Q9QZR9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a4Q9QZR9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms