Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim60Q8VI40 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim60Q8VI40 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim60Q8VI40 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim60Q8VI40 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim60Q8VI40 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.74■□□□□ 0.75
Trim60Q8VI40 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim60Q8VI40 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.73■□□□□ 0.75
Trim60Q8VI40 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim60Q8VI40 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim60Q8VI40 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim60Q8VI40 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim60Q8VI40 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim60Q8VI40 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim60Q8VI40 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.73■□□□□ 0.75
Trim60Q8VI40 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim60Q8VI40 BC021767-201ENSMUST00000126387 1716 ntBASIC19.73■□□□□ 0.75
Trim60Q8VI40 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim60Q8VI40 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim60Q8VI40 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.72■□□□□ 0.75
Trim60Q8VI40 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.72■□□□□ 0.75
Trim60Q8VI40 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim60Q8VI40 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim60Q8VI40 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim60Q8VI40 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim60Q8VI40 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms