Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.59■□□□□ 0.57
Q8VDP2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Gm7332-201ENSMUST00000118351 454 ntBASIC18.59■□□□□ 0.57
Q8VDP2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q8VDP2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q8VDP2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.58■□□□□ 0.56
Q8VDP2 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.58■□□□□ 0.56
Q8VDP2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Q8VDP2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q8VDP2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.57■□□□□ 0.56
Q8VDP2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Q8VDP2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Q8VDP2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q8VDP2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.56■□□□□ 0.56
Q8VDP2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8VDP2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Q8VDP2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.56■□□□□ 0.56
Q8VDP2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Q8VDP2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8VDP2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8VDP2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8VDP2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8VDP2 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.56■□□□□ 0.56
Q8VDP2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8VDP2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8VDP2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Gm27502-201ENSMUST00000183495 199 ntBASIC18.55■□□□□ 0.56
Q8VDP2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.55■□□□□ 0.56
Q8VDP2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8VDP2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.54■□□□□ 0.56
Q8VDP2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Q8VDP2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Q8VDP2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8VDP2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Q8VDP2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.53■□□□□ 0.56
Q8VDP2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Q8VDP2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8VDP2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.53■□□□□ 0.56
Q8VDP2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms