Protein–RNA interactions for Protein: Q8VDN2

Atp1a1, Sodium/potassium-transporting ATPase subunit alpha-1, mousemouse

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp1a1Q8VDN2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atp1a1Q8VDN2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atp1a1Q8VDN2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atp1a1Q8VDN2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.7■□□□□ 0.9
Atp1a1Q8VDN2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Gm9847-201ENSMUST00000052528 599 ntBASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp1a1Q8VDN2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atp1a1Q8VDN2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Atp1a1Q8VDN2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Gm43137-201ENSMUST00000198052 594 ntBASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp1a1Q8VDN2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp1a1Q8VDN2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp1a1Q8VDN2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Atp1a1Q8VDN2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp1a1Q8VDN2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp1a1Q8VDN2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atp1a1Q8VDN2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.64■□□□□ 0.89
Atp1a1Q8VDN2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Atp1a1Q8VDN2 Spcs1-204ENSMUST00000226782 949 ntBASIC20.64■□□□□ 0.89
Atp1a1Q8VDN2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp1a1Q8VDN2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp1a1Q8VDN2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Atp1a1Q8VDN2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atp1a1Q8VDN2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Atp1a1Q8VDN2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp1a1Q8VDN2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp1a1Q8VDN2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Atp1a1Q8VDN2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms