Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Smim4Q8C1Q6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smim4Q8C1Q6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Smim4Q8C1Q6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Smim4Q8C1Q6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.96■□□□□ 0.14
Smim4Q8C1Q6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Smim4Q8C1Q6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smim4Q8C1Q6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Smim4Q8C1Q6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
Smim4Q8C1Q6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smim4Q8C1Q6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Smim4Q8C1Q6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.95■□□□□ 0.14
Smim4Q8C1Q6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Serp2-204ENSMUST00000228055 705 ntBASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms