Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pfn1P62962 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pfn1P62962 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfn1P62962 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pfn1P62962 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pfn1P62962 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfn1P62962 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfn1P62962 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pfn1P62962 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Gm45444-201ENSMUST00000211394 898 ntBASIC14.83□□□□□ -0.04
Pfn1P62962 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.83□□□□□ -0.04
Pfn1P62962 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.83□□□□□ -0.04
Pfn1P62962 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pfn1P62962 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pfn1P62962 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfn1P62962 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfn1P62962 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfn1P62962 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfn1P62962 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pfn1P62962 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfn1P62962 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.81□□□□□ -0.04
Pfn1P62962 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Pfn1P62962 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.81□□□□□ -0.04
Pfn1P62962 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfn1P62962 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.8□□□□□ -0.04
Pfn1P62962 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfn1P62962 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfn1P62962 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pfn1P62962 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfn1P62962 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.8□□□□□ -0.04
Pfn1P62962 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pfn1P62962 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pfn1P62962 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.8□□□□□ -0.04
Pfn1P62962 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pfn1P62962 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfn1P62962 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Pfn1P62962 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.79□□□□□ -0.04
Pfn1P62962 Gm10399-202ENSMUST00000202768 748 ntBASIC14.79□□□□□ -0.04
Pfn1P62962 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.79□□□□□ -0.04
Pfn1P62962 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.79□□□□□ -0.04
Pfn1P62962 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfn1P62962 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.78□□□□□ -0.04
Pfn1P62962 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pfn1P62962 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.78□□□□□ -0.04
Pfn1P62962 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfn1P62962 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pfn1P62962 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pfn1P62962 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfn1P62962 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfn1P62962 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pfn1P62962 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.78□□□□□ -0.04
Pfn1P62962 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.78□□□□□ -0.04
Pfn1P62962 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pfn1P62962 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfn1P62962 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfn1P62962 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms