Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.87■■□□□ 1.89
Smarcb1Q9Z0H3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Smarcb1Q9Z0H3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smarcb1Q9Z0H3 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.85■■□□□ 1.89
Smarcb1Q9Z0H3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Smarcb1Q9Z0H3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.83■■□□□ 1.89
Smarcb1Q9Z0H3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Smarcb1Q9Z0H3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.83■■□□□ 1.89
Smarcb1Q9Z0H3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smarcb1Q9Z0H3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Smarcb1Q9Z0H3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Smarcb1Q9Z0H3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Smarcb1Q9Z0H3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Smarcb1Q9Z0H3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.79■■□□□ 1.88
Smarcb1Q9Z0H3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.77■■□□□ 1.88
Smarcb1Q9Z0H3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.76■■□□□ 1.87
Smarcb1Q9Z0H3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smarcb1Q9Z0H3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smarcb1Q9Z0H3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Smarcb1Q9Z0H3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Smarcb1Q9Z0H3 Gm24970-201ENSMUST00000175582 82 ntBASIC26.74■■□□□ 1.87
Smarcb1Q9Z0H3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Smarcb1Q9Z0H3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smarcb1Q9Z0H3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.73■■□□□ 1.87
Smarcb1Q9Z0H3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smarcb1Q9Z0H3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Smarcb1Q9Z0H3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.71■■□□□ 1.87
Smarcb1Q9Z0H3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Smarcb1Q9Z0H3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Smarcb1Q9Z0H3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Smarcb1Q9Z0H3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Smarcb1Q9Z0H3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smarcb1Q9Z0H3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smarcb1Q9Z0H3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Smarcb1Q9Z0H3 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.68■■□□□ 1.86
Smarcb1Q9Z0H3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.67■■□□□ 1.86
Smarcb1Q9Z0H3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
Smarcb1Q9Z0H3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Smarcb1Q9Z0H3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Smarcb1Q9Z0H3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Smarcb1Q9Z0H3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Smarcb1Q9Z0H3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Smarcb1Q9Z0H3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Smarcb1Q9Z0H3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smarcb1Q9Z0H3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smarcb1Q9Z0H3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smarcb1Q9Z0H3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Smarcb1Q9Z0H3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Smarcb1Q9Z0H3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Smarcb1Q9Z0H3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Smarcb1Q9Z0H3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smarcb1Q9Z0H3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smarcb1Q9Z0H3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Smarcb1Q9Z0H3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smarcb1Q9Z0H3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Smarcb1Q9Z0H3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smarcb1Q9Z0H3 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.5■■□□□ 1.83
Smarcb1Q9Z0H3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smarcb1Q9Z0H3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
Smarcb1Q9Z0H3 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.49■■□□□ 1.83
Smarcb1Q9Z0H3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.49■■□□□ 1.83
Smarcb1Q9Z0H3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Smarcb1Q9Z0H3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.47■■□□□ 1.83
Smarcb1Q9Z0H3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smarcb1Q9Z0H3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Smarcb1Q9Z0H3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Smarcb1Q9Z0H3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Smarcb1Q9Z0H3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.44■■□□□ 1.82
Smarcb1Q9Z0H3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Smarcb1Q9Z0H3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smarcb1Q9Z0H3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Smarcb1Q9Z0H3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Smarcb1Q9Z0H3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Smarcb1Q9Z0H3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Smarcb1Q9Z0H3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smarcb1Q9Z0H3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smarcb1Q9Z0H3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.4■■□□□ 1.82
Smarcb1Q9Z0H3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Smarcb1Q9Z0H3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smarcb1Q9Z0H3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smarcb1Q9Z0H3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smarcb1Q9Z0H3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Smarcb1Q9Z0H3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Smarcb1Q9Z0H3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smarcb1Q9Z0H3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Smarcb1Q9Z0H3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Smarcb1Q9Z0H3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.35■■□□□ 1.81
Smarcb1Q9Z0H3 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.35■■□□□ 1.81
Smarcb1Q9Z0H3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.35■■□□□ 1.81
Smarcb1Q9Z0H3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Smarcb1Q9Z0H3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smarcb1Q9Z0H3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.3■■□□□ 1.8
Smarcb1Q9Z0H3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smarcb1Q9Z0H3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarcb1Q9Z0H3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smarcb1Q9Z0H3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.25■■□□□ 1.79
Smarcb1Q9Z0H3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smarcb1Q9Z0H3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Smarcb1Q9Z0H3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smarcb1Q9Z0H3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms