Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm4Q9QXA5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm4Q9QXA5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm4Q9QXA5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm4Q9QXA5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm4Q9QXA5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Lsm4Q9QXA5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.93■□□□□ 0.78
Lsm4Q9QXA5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm4Q9QXA5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Lsm4Q9QXA5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lsm4Q9QXA5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.91■□□□□ 0.78
Lsm4Q9QXA5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.91■□□□□ 0.78
Lsm4Q9QXA5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm4Q9QXA5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lsm4Q9QXA5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm4Q9QXA5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm4Q9QXA5 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.89■□□□□ 0.77
Lsm4Q9QXA5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm4Q9QXA5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm4Q9QXA5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm4Q9QXA5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm4Q9QXA5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm4Q9QXA5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm4Q9QXA5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm4Q9QXA5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.85■□□□□ 0.77
Lsm4Q9QXA5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm4Q9QXA5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lsm4Q9QXA5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm4Q9QXA5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm4Q9QXA5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.84■□□□□ 0.77
Lsm4Q9QXA5 Gm25262-201ENSMUST00000174934 133 ntBASIC19.84■□□□□ 0.77
Lsm4Q9QXA5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.84■□□□□ 0.77
Lsm4Q9QXA5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm4Q9QXA5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm4Q9QXA5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm4Q9QXA5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm4Q9QXA5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm4Q9QXA5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm4Q9QXA5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lsm4Q9QXA5 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.82■□□□□ 0.76
Lsm4Q9QXA5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.82■□□□□ 0.76
Lsm4Q9QXA5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm4Q9QXA5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.81■□□□□ 0.76
Lsm4Q9QXA5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Lsm4Q9QXA5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm4Q9QXA5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm4Q9QXA5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm4Q9QXA5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm4Q9QXA5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Lsm4Q9QXA5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm4Q9QXA5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.78■□□□□ 0.76
Lsm4Q9QXA5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm4Q9QXA5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.77■□□□□ 0.76
Lsm4Q9QXA5 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.76■□□□□ 0.75
Lsm4Q9QXA5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm4Q9QXA5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.75■□□□□ 0.75
Lsm4Q9QXA5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm4Q9QXA5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm4Q9QXA5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm4Q9QXA5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm4Q9QXA5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm4Q9QXA5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm4Q9QXA5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm4Q9QXA5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm4Q9QXA5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm4Q9QXA5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm4Q9QXA5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm4Q9QXA5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Lsm4Q9QXA5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm4Q9QXA5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm4Q9QXA5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm4Q9QXA5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm4Q9QXA5 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.67■□□□□ 0.74
Lsm4Q9QXA5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Lsm4Q9QXA5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm4Q9QXA5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lsm4Q9QXA5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm4Q9QXA5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm4Q9QXA5 Gm27322-201ENSMUST00000184007 104 ntBASIC19.64■□□□□ 0.73
Lsm4Q9QXA5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm4Q9QXA5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.64■□□□□ 0.73
Lsm4Q9QXA5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm4Q9QXA5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm4Q9QXA5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Lsm4Q9QXA5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm4Q9QXA5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lsm4Q9QXA5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Lsm4Q9QXA5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm4Q9QXA5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lsm4Q9QXA5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm4Q9QXA5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.6■□□□□ 0.73
Lsm4Q9QXA5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.6■□□□□ 0.73
Lsm4Q9QXA5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm4Q9QXA5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm4Q9QXA5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Lsm4Q9QXA5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm4Q9QXA5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm4Q9QXA5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm4Q9QXA5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm4Q9QXA5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms