Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sec61a2Q9JLR1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.53■■□□□ 1.2
Sec61a2Q9JLR1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sec61a2Q9JLR1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sec61a2Q9JLR1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sec61a2Q9JLR1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sec61a2Q9JLR1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
Sec61a2Q9JLR1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.51■■□□□ 1.19
Sec61a2Q9JLR1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Sec61a2Q9JLR1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Sec61a2Q9JLR1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sec61a2Q9JLR1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Sec61a2Q9JLR1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sec61a2Q9JLR1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sec61a2Q9JLR1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Sec61a2Q9JLR1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sec61a2Q9JLR1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
Sec61a2Q9JLR1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sec61a2Q9JLR1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sec61a2Q9JLR1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
Sec61a2Q9JLR1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.45■■□□□ 1.18
Sec61a2Q9JLR1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Sec61a2Q9JLR1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sec61a2Q9JLR1 Gm16148-201ENSMUST00000119653 893 ntBASIC22.41■■□□□ 1.18
Sec61a2Q9JLR1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sec61a2Q9JLR1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sec61a2Q9JLR1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sec61a2Q9JLR1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sec61a2Q9JLR1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sec61a2Q9JLR1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sec61a2Q9JLR1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sec61a2Q9JLR1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Sec61a2Q9JLR1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sec61a2Q9JLR1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sec61a2Q9JLR1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sec61a2Q9JLR1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sec61a2Q9JLR1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sec61a2Q9JLR1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sec61a2Q9JLR1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sec61a2Q9JLR1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sec61a2Q9JLR1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sec61a2Q9JLR1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sec61a2Q9JLR1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sec61a2Q9JLR1 Zfp131-205ENSMUST00000223812 663 ntBASIC22.31■■□□□ 1.16
Sec61a2Q9JLR1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sec61a2Q9JLR1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sec61a2Q9JLR1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sec61a2Q9JLR1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.29■■□□□ 1.16
Sec61a2Q9JLR1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sec61a2Q9JLR1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Sec61a2Q9JLR1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.26■■□□□ 1.15
Sec61a2Q9JLR1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Sec61a2Q9JLR1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sec61a2Q9JLR1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sec61a2Q9JLR1 Zxda-201ENSMUST00000117281 2621 ntBASIC22.25■■□□□ 1.15
Sec61a2Q9JLR1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Sec61a2Q9JLR1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Sec61a2Q9JLR1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Sec61a2Q9JLR1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Sec61a2Q9JLR1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sec61a2Q9JLR1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Sec61a2Q9JLR1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sec61a2Q9JLR1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sec61a2Q9JLR1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Sec61a2Q9JLR1 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.2■■□□□ 1.15
Sec61a2Q9JLR1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.2■■□□□ 1.14
Sec61a2Q9JLR1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sec61a2Q9JLR1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sec61a2Q9JLR1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sec61a2Q9JLR1 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.19■■□□□ 1.14
Sec61a2Q9JLR1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Sec61a2Q9JLR1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Sec61a2Q9JLR1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a2Q9JLR1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a2Q9JLR1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.16■■□□□ 1.14
Sec61a2Q9JLR1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Sec61a2Q9JLR1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sec61a2Q9JLR1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sec61a2Q9JLR1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sec61a2Q9JLR1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sec61a2Q9JLR1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sec61a2Q9JLR1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sec61a2Q9JLR1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sec61a2Q9JLR1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.13■■□□□ 1.13
Sec61a2Q9JLR1 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.13■■□□□ 1.13
Sec61a2Q9JLR1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Sec61a2Q9JLR1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a2Q9JLR1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a2Q9JLR1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a2Q9JLR1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a2Q9JLR1 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.12■■□□□ 1.13
Sec61a2Q9JLR1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.11■■□□□ 1.13
Sec61a2Q9JLR1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sec61a2Q9JLR1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sec61a2Q9JLR1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.1■■□□□ 1.13
Sec61a2Q9JLR1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sec61a2Q9JLR1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sec61a2Q9JLR1 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.09■■□□□ 1.13
Sec61a2Q9JLR1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sec61a2Q9JLR1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms