Protein–RNA interactions for Protein: Q9JJI8

Rpl38, 60S ribosomal protein L38, mousemouse

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl38Q9JJI8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpl38Q9JJI8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpl38Q9JJI8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rpl38Q9JJI8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Rpl38Q9JJI8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
Rpl38Q9JJI8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.31■■□□□ 1.48
Rpl38Q9JJI8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
Rpl38Q9JJI8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpl38Q9JJI8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpl38Q9JJI8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpl38Q9JJI8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rpl38Q9JJI8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.29■■□□□ 1.48
Rpl38Q9JJI8 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.26■■□□□ 1.47
Rpl38Q9JJI8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Rpl38Q9JJI8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.25■■□□□ 1.47
Rpl38Q9JJI8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Rpl38Q9JJI8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rpl38Q9JJI8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rpl38Q9JJI8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rpl38Q9JJI8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Rpl38Q9JJI8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rpl38Q9JJI8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rpl38Q9JJI8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rpl38Q9JJI8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rpl38Q9JJI8 Peli2-204ENSMUST00000226513 1320 ntBASIC24.19■■□□□ 1.46
Rpl38Q9JJI8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rpl38Q9JJI8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Rpl38Q9JJI8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rpl38Q9JJI8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rpl38Q9JJI8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rpl38Q9JJI8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rpl38Q9JJI8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpl38Q9JJI8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rpl38Q9JJI8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.15■■□□□ 1.46
Rpl38Q9JJI8 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.15■■□□□ 1.46
Rpl38Q9JJI8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpl38Q9JJI8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpl38Q9JJI8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Rpl38Q9JJI8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpl38Q9JJI8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpl38Q9JJI8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rpl38Q9JJI8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpl38Q9JJI8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rpl38Q9JJI8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpl38Q9JJI8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpl38Q9JJI8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Rpl38Q9JJI8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rpl38Q9JJI8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Rpl38Q9JJI8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
Rpl38Q9JJI8 Amer2-203ENSMUST00000225247 2662 ntBASIC24.07■■□□□ 1.44
Rpl38Q9JJI8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpl38Q9JJI8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpl38Q9JJI8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpl38Q9JJI8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpl38Q9JJI8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rpl38Q9JJI8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rpl38Q9JJI8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpl38Q9JJI8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpl38Q9JJI8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rpl38Q9JJI8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpl38Q9JJI8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpl38Q9JJI8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpl38Q9JJI8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
Rpl38Q9JJI8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpl38Q9JJI8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.01■■□□□ 1.43
Rpl38Q9JJI8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.01■■□□□ 1.43
Rpl38Q9JJI8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.01■■□□□ 1.43
Rpl38Q9JJI8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpl38Q9JJI8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24■■□□□ 1.43
Rpl38Q9JJI8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rpl38Q9JJI8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rpl38Q9JJI8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpl38Q9JJI8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Rpl38Q9JJI8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpl38Q9JJI8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpl38Q9JJI8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.96■■□□□ 1.43
Rpl38Q9JJI8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Rpl38Q9JJI8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rpl38Q9JJI8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpl38Q9JJI8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.94■■□□□ 1.42
Rpl38Q9JJI8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Rpl38Q9JJI8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpl38Q9JJI8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rpl38Q9JJI8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rpl38Q9JJI8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpl38Q9JJI8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
Rpl38Q9JJI8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpl38Q9JJI8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpl38Q9JJI8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.87■■□□□ 1.41
Rpl38Q9JJI8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpl38Q9JJI8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpl38Q9JJI8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Rpl38Q9JJI8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpl38Q9JJI8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rpl38Q9JJI8 Gm24804-201ENSMUST00000174982 85 ntBASIC23.84■■□□□ 1.41
Rpl38Q9JJI8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpl38Q9JJI8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.83■■□□□ 1.41
Rpl38Q9JJI8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpl38Q9JJI8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rpl38Q9JJI8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms