Protein–RNA interactions for Protein: Q9EPB8

Vmn1r54, Vomeronasal type-1 receptor 54, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r54Q9EPB8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r54Q9EPB8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r54Q9EPB8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r54Q9EPB8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Vmn1r54Q9EPB8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r54Q9EPB8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r54Q9EPB8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r54Q9EPB8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Vmn1r54Q9EPB8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r54Q9EPB8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r54Q9EPB8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vmn1r54Q9EPB8 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.35■□□□□ 0.85
Vmn1r54Q9EPB8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r54Q9EPB8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r54Q9EPB8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Vmn1r54Q9EPB8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r54Q9EPB8 Amer2-203ENSMUST00000225247 2662 ntBASIC20.32■□□□□ 0.84
Vmn1r54Q9EPB8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Vmn1r54Q9EPB8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r54Q9EPB8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r54Q9EPB8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r54Q9EPB8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r54Q9EPB8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r54Q9EPB8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r54Q9EPB8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r54Q9EPB8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.25■□□□□ 0.83
Vmn1r54Q9EPB8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.25■□□□□ 0.83
Vmn1r54Q9EPB8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vmn1r54Q9EPB8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r54Q9EPB8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r54Q9EPB8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r54Q9EPB8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.23■□□□□ 0.83
Vmn1r54Q9EPB8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r54Q9EPB8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r54Q9EPB8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r54Q9EPB8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.22■□□□□ 0.83
Vmn1r54Q9EPB8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r54Q9EPB8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r54Q9EPB8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r54Q9EPB8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r54Q9EPB8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r54Q9EPB8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Vmn1r54Q9EPB8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r54Q9EPB8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r54Q9EPB8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vmn1r54Q9EPB8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Vmn1r54Q9EPB8 Gm24804-201ENSMUST00000174982 85 ntBASIC20.18■□□□□ 0.82
Vmn1r54Q9EPB8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.18■□□□□ 0.82
Vmn1r54Q9EPB8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r54Q9EPB8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r54Q9EPB8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r54Q9EPB8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r54Q9EPB8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r54Q9EPB8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.16■□□□□ 0.82
Vmn1r54Q9EPB8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r54Q9EPB8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r54Q9EPB8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r54Q9EPB8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r54Q9EPB8 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.13■□□□□ 0.81
Vmn1r54Q9EPB8 Peli2-204ENSMUST00000226513 1320 ntBASIC20.13■□□□□ 0.81
Vmn1r54Q9EPB8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r54Q9EPB8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r54Q9EPB8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r54Q9EPB8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Vmn1r54Q9EPB8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r54Q9EPB8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r54Q9EPB8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Vmn1r54Q9EPB8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r54Q9EPB8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r54Q9EPB8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Vmn1r54Q9EPB8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vmn1r54Q9EPB8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r54Q9EPB8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r54Q9EPB8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Vmn1r54Q9EPB8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.06■□□□□ 0.8
Vmn1r54Q9EPB8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r54Q9EPB8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r54Q9EPB8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r54Q9EPB8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vmn1r54Q9EPB8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r54Q9EPB8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r54Q9EPB8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r54Q9EPB8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r54Q9EPB8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r54Q9EPB8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.01■□□□□ 0.79
Vmn1r54Q9EPB8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vmn1r54Q9EPB8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r54Q9EPB8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r54Q9EPB8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r54Q9EPB8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r54Q9EPB8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r54Q9EPB8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r54Q9EPB8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r54Q9EPB8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r54Q9EPB8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r54Q9EPB8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r54Q9EPB8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r54Q9EPB8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.95■□□□□ 0.78
Vmn1r54Q9EPB8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.95■□□□□ 0.78
Vmn1r54Q9EPB8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms