Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Chmp5Q9D7S9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Chmp5Q9D7S9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Chmp5Q9D7S9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Chmp5Q9D7S9 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.62■■■□□ 2.65
Chmp5Q9D7S9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Chmp5Q9D7S9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Chmp5Q9D7S9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Chmp5Q9D7S9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Chmp5Q9D7S9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Chmp5Q9D7S9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Chmp5Q9D7S9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Chmp5Q9D7S9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Chmp5Q9D7S9 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.54■■■□□ 2.64
Chmp5Q9D7S9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Chmp5Q9D7S9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Chmp5Q9D7S9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Chmp5Q9D7S9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
Chmp5Q9D7S9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
Chmp5Q9D7S9 Gm27322-201ENSMUST00000184007 104 ntBASIC31.5■■■□□ 2.63
Chmp5Q9D7S9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.5■■■□□ 2.63
Chmp5Q9D7S9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Chmp5Q9D7S9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
Chmp5Q9D7S9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.49■■■□□ 2.63
Chmp5Q9D7S9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.48■■■□□ 2.63
Chmp5Q9D7S9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
Chmp5Q9D7S9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chmp5Q9D7S9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Chmp5Q9D7S9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Chmp5Q9D7S9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Chmp5Q9D7S9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.44■■■□□ 2.62
Chmp5Q9D7S9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.43■■■□□ 2.62
Chmp5Q9D7S9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.42■■■□□ 2.62
Chmp5Q9D7S9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
Chmp5Q9D7S9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.41■■■□□ 2.62
Chmp5Q9D7S9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Chmp5Q9D7S9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Chmp5Q9D7S9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Chmp5Q9D7S9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Chmp5Q9D7S9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
Chmp5Q9D7S9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.37■■■□□ 2.61
Chmp5Q9D7S9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Chmp5Q9D7S9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Chmp5Q9D7S9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Chmp5Q9D7S9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.34■■■□□ 2.61
Chmp5Q9D7S9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Chmp5Q9D7S9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Chmp5Q9D7S9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.33■■■□□ 2.61
Chmp5Q9D7S9 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.32■■■□□ 2.6
Chmp5Q9D7S9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Chmp5Q9D7S9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Chmp5Q9D7S9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Chmp5Q9D7S9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Chmp5Q9D7S9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Chmp5Q9D7S9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Chmp5Q9D7S9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Chmp5Q9D7S9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Chmp5Q9D7S9 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.27■■■□□ 2.6
Chmp5Q9D7S9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Chmp5Q9D7S9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Chmp5Q9D7S9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Chmp5Q9D7S9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Chmp5Q9D7S9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chmp5Q9D7S9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chmp5Q9D7S9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chmp5Q9D7S9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Chmp5Q9D7S9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Chmp5Q9D7S9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Chmp5Q9D7S9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Chmp5Q9D7S9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Chmp5Q9D7S9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Chmp5Q9D7S9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Chmp5Q9D7S9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.19■■■□□ 2.58
Chmp5Q9D7S9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Chmp5Q9D7S9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Chmp5Q9D7S9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.18■■■□□ 2.58
Chmp5Q9D7S9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Chmp5Q9D7S9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Chmp5Q9D7S9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Chmp5Q9D7S9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chmp5Q9D7S9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chmp5Q9D7S9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Chmp5Q9D7S9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chmp5Q9D7S9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chmp5Q9D7S9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.11■■■□□ 2.57
Chmp5Q9D7S9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.1■■■□□ 2.57
Chmp5Q9D7S9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
Chmp5Q9D7S9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Chmp5Q9D7S9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chmp5Q9D7S9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chmp5Q9D7S9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Chmp5Q9D7S9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Chmp5Q9D7S9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Chmp5Q9D7S9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.03■■■□□ 2.56
Chmp5Q9D7S9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Chmp5Q9D7S9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Chmp5Q9D7S9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Chmp5Q9D7S9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Chmp5Q9D7S9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31■■■□□ 2.55
Chmp5Q9D7S9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms