Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.11■□□□□ 0.97
ShpkQ9D5J6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.11■□□□□ 0.97
ShpkQ9D5J6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ShpkQ9D5J6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShpkQ9D5J6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ShpkQ9D5J6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShpkQ9D5J6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ShpkQ9D5J6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShpkQ9D5J6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShpkQ9D5J6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ShpkQ9D5J6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShpkQ9D5J6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShpkQ9D5J6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.06■□□□□ 0.96
ShpkQ9D5J6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShpkQ9D5J6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShpkQ9D5J6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ShpkQ9D5J6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShpkQ9D5J6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShpkQ9D5J6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ShpkQ9D5J6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21■□□□□ 0.95
ShpkQ9D5J6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21■□□□□ 0.95
ShpkQ9D5J6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21■□□□□ 0.95
ShpkQ9D5J6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ShpkQ9D5J6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ShpkQ9D5J6 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.98■□□□□ 0.95
ShpkQ9D5J6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShpkQ9D5J6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShpkQ9D5J6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ShpkQ9D5J6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ShpkQ9D5J6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ShpkQ9D5J6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ShpkQ9D5J6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ShpkQ9D5J6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ShpkQ9D5J6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ShpkQ9D5J6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.93■□□□□ 0.94
ShpkQ9D5J6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ShpkQ9D5J6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ShpkQ9D5J6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ShpkQ9D5J6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShpkQ9D5J6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShpkQ9D5J6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ShpkQ9D5J6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShpkQ9D5J6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.88■□□□□ 0.93
ShpkQ9D5J6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShpkQ9D5J6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShpkQ9D5J6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShpkQ9D5J6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ShpkQ9D5J6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShpkQ9D5J6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShpkQ9D5J6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShpkQ9D5J6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShpkQ9D5J6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShpkQ9D5J6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ShpkQ9D5J6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShpkQ9D5J6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ShpkQ9D5J6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ShpkQ9D5J6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShpkQ9D5J6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShpkQ9D5J6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ShpkQ9D5J6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShpkQ9D5J6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShpkQ9D5J6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.77■□□□□ 0.91
ShpkQ9D5J6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShpkQ9D5J6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.76■□□□□ 0.91
ShpkQ9D5J6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ShpkQ9D5J6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ShpkQ9D5J6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShpkQ9D5J6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ShpkQ9D5J6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShpkQ9D5J6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ShpkQ9D5J6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShpkQ9D5J6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ShpkQ9D5J6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShpkQ9D5J6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ShpkQ9D5J6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShpkQ9D5J6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ShpkQ9D5J6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ShpkQ9D5J6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShpkQ9D5J6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.72■□□□□ 0.91
ShpkQ9D5J6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ShpkQ9D5J6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ShpkQ9D5J6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ShpkQ9D5J6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShpkQ9D5J6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShpkQ9D5J6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ShpkQ9D5J6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ShpkQ9D5J6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
ShpkQ9D5J6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShpkQ9D5J6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShpkQ9D5J6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShpkQ9D5J6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ShpkQ9D5J6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ShpkQ9D5J6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShpkQ9D5J6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShpkQ9D5J6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShpkQ9D5J6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ShpkQ9D5J6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ShpkQ9D5J6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
ShpkQ9D5J6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShpkQ9D5J6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms