Protein–RNA interactions for Protein: Q9CXS0

3110018I06Rik, RIKEN cDNA 3110018I06 gene, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110018I06RikQ9CXS0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
3110018I06RikQ9CXS0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
3110018I06RikQ9CXS0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
3110018I06RikQ9CXS0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.32■□□□□ 0.68
3110018I06RikQ9CXS0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
3110018I06RikQ9CXS0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
3110018I06RikQ9CXS0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
3110018I06RikQ9CXS0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
3110018I06RikQ9CXS0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
3110018I06RikQ9CXS0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
3110018I06RikQ9CXS0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.28■□□□□ 0.68
3110018I06RikQ9CXS0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.27■□□□□ 0.68
3110018I06RikQ9CXS0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
3110018I06RikQ9CXS0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
3110018I06RikQ9CXS0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
3110018I06RikQ9CXS0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
3110018I06RikQ9CXS0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
3110018I06RikQ9CXS0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
3110018I06RikQ9CXS0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.25■□□□□ 0.67
3110018I06RikQ9CXS0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
3110018I06RikQ9CXS0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
3110018I06RikQ9CXS0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
3110018I06RikQ9CXS0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
3110018I06RikQ9CXS0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
3110018I06RikQ9CXS0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
3110018I06RikQ9CXS0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.21■□□□□ 0.67
3110018I06RikQ9CXS0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
3110018I06RikQ9CXS0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
3110018I06RikQ9CXS0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
3110018I06RikQ9CXS0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
3110018I06RikQ9CXS0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
3110018I06RikQ9CXS0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
3110018I06RikQ9CXS0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
3110018I06RikQ9CXS0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
3110018I06RikQ9CXS0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
3110018I06RikQ9CXS0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
3110018I06RikQ9CXS0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 Zfp131-205ENSMUST00000223812 663 ntBASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
3110018I06RikQ9CXS0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
3110018I06RikQ9CXS0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
3110018I06RikQ9CXS0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
3110018I06RikQ9CXS0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
3110018I06RikQ9CXS0 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.13■□□□□ 0.65
3110018I06RikQ9CXS0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
3110018I06RikQ9CXS0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
3110018I06RikQ9CXS0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
3110018I06RikQ9CXS0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
3110018I06RikQ9CXS0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
3110018I06RikQ9CXS0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
3110018I06RikQ9CXS0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
3110018I06RikQ9CXS0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
3110018I06RikQ9CXS0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
3110018I06RikQ9CXS0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
3110018I06RikQ9CXS0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
3110018I06RikQ9CXS0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
3110018I06RikQ9CXS0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
3110018I06RikQ9CXS0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
3110018I06RikQ9CXS0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
3110018I06RikQ9CXS0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
3110018I06RikQ9CXS0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.06■□□□□ 0.64
3110018I06RikQ9CXS0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
3110018I06RikQ9CXS0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
3110018I06RikQ9CXS0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.04■□□□□ 0.64
3110018I06RikQ9CXS0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
3110018I06RikQ9CXS0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.03■□□□□ 0.64
3110018I06RikQ9CXS0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
3110018I06RikQ9CXS0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
3110018I06RikQ9CXS0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
3110018I06RikQ9CXS0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.02■□□□□ 0.64
3110018I06RikQ9CXS0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.01■□□□□ 0.63
3110018I06RikQ9CXS0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
3110018I06RikQ9CXS0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
3110018I06RikQ9CXS0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
3110018I06RikQ9CXS0 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.99■□□□□ 0.63
3110018I06RikQ9CXS0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
3110018I06RikQ9CXS0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
3110018I06RikQ9CXS0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
3110018I06RikQ9CXS0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
3110018I06RikQ9CXS0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
3110018I06RikQ9CXS0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
3110018I06RikQ9CXS0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
3110018I06RikQ9CXS0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
3110018I06RikQ9CXS0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
3110018I06RikQ9CXS0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
3110018I06RikQ9CXS0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.95■□□□□ 0.62
3110018I06RikQ9CXS0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
3110018I06RikQ9CXS0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
3110018I06RikQ9CXS0 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.94■□□□□ 0.62
3110018I06RikQ9CXS0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
3110018I06RikQ9CXS0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
3110018I06RikQ9CXS0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
3110018I06RikQ9CXS0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
3110018I06RikQ9CXS0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
3110018I06RikQ9CXS0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms