Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Raf1Q99N57 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Raf1Q99N57 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Raf1Q99N57 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Raf1Q99N57 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Raf1Q99N57 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Raf1Q99N57 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.4■■□□□ 1.18
Raf1Q99N57 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.4■■□□□ 1.18
Raf1Q99N57 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Raf1Q99N57 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Raf1Q99N57 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
Raf1Q99N57 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Raf1Q99N57 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.37■■□□□ 1.17
Raf1Q99N57 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Raf1Q99N57 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Raf1Q99N57 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.35■■□□□ 1.17
Raf1Q99N57 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Raf1Q99N57 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Raf1Q99N57 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Raf1Q99N57 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Raf1Q99N57 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Raf1Q99N57 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Raf1Q99N57 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.29■■□□□ 1.16
Raf1Q99N57 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Raf1Q99N57 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
Raf1Q99N57 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Raf1Q99N57 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Raf1Q99N57 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Raf1Q99N57 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Raf1Q99N57 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Raf1Q99N57 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Raf1Q99N57 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Raf1Q99N57 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Raf1Q99N57 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.22■■□□□ 1.15
Raf1Q99N57 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Raf1Q99N57 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Raf1Q99N57 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Raf1Q99N57 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Raf1Q99N57 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.2■■□□□ 1.14
Raf1Q99N57 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Raf1Q99N57 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Raf1Q99N57 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.2■■□□□ 1.14
Raf1Q99N57 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Raf1Q99N57 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Raf1Q99N57 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Raf1Q99N57 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Raf1Q99N57 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Raf1Q99N57 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Raf1Q99N57 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Raf1Q99N57 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Raf1Q99N57 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Raf1Q99N57 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Raf1Q99N57 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Raf1Q99N57 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Raf1Q99N57 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Raf1Q99N57 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Raf1Q99N57 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Raf1Q99N57 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Raf1Q99N57 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
Raf1Q99N57 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Raf1Q99N57 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Raf1Q99N57 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Raf1Q99N57 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Raf1Q99N57 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Raf1Q99N57 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Raf1Q99N57 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Raf1Q99N57 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Raf1Q99N57 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Raf1Q99N57 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Raf1Q99N57 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Raf1Q99N57 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Raf1Q99N57 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Raf1Q99N57 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Raf1Q99N57 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Raf1Q99N57 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Raf1Q99N57 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.02■■□□□ 1.12
Raf1Q99N57 Gm16148-201ENSMUST00000119653 893 ntBASIC22.02■■□□□ 1.12
Raf1Q99N57 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Raf1Q99N57 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Raf1Q99N57 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Raf1Q99N57 Amer2-203ENSMUST00000225247 2662 ntBASIC22.01■■□□□ 1.11
Raf1Q99N57 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22■■□□□ 1.11
Raf1Q99N57 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Raf1Q99N57 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Raf1Q99N57 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Raf1Q99N57 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Raf1Q99N57 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Raf1Q99N57 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Raf1Q99N57 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Raf1Q99N57 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Raf1Q99N57 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Raf1Q99N57 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Raf1Q99N57 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Raf1Q99N57 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Raf1Q99N57 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Raf1Q99N57 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Raf1Q99N57 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.96■■□□□ 1.11
Raf1Q99N57 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Raf1Q99N57 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.95■■□□□ 1.1
Raf1Q99N57 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms