Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.9■■□□□ 1.9
Pcdha11Q91Y19 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha11Q91Y19 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Pcdha11Q91Y19 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha11Q91Y19 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha11Q91Y19 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdha11Q91Y19 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdha11Q91Y19 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Pcdha11Q91Y19 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha11Q91Y19 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha11Q91Y19 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha11Q91Y19 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Pcdha11Q91Y19 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdha11Q91Y19 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha11Q91Y19 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha11Q91Y19 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Pcdha11Q91Y19 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha11Q91Y19 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha11Q91Y19 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.88
Pcdha11Q91Y19 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdha11Q91Y19 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdha11Q91Y19 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pcdha11Q91Y19 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdha11Q91Y19 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha11Q91Y19 Gm45855-201ENSMUST00000212546 880 ntBASIC26.69■■□□□ 1.86
Pcdha11Q91Y19 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdha11Q91Y19 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha11Q91Y19 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha11Q91Y19 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.65■■□□□ 1.86
Pcdha11Q91Y19 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdha11Q91Y19 Gm9397-201ENSMUST00000200125 605 ntBASIC26.64■■□□□ 1.86
Pcdha11Q91Y19 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.64■■□□□ 1.85
Pcdha11Q91Y19 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.64■■□□□ 1.85
Pcdha11Q91Y19 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.63■■□□□ 1.85
Pcdha11Q91Y19 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdha11Q91Y19 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdha11Q91Y19 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdha11Q91Y19 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha11Q91Y19 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.6■■□□□ 1.85
Pcdha11Q91Y19 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.6■■□□□ 1.85
Pcdha11Q91Y19 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha11Q91Y19 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdha11Q91Y19 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdha11Q91Y19 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdha11Q91Y19 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdha11Q91Y19 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdha11Q91Y19 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
Pcdha11Q91Y19 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdha11Q91Y19 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.53■■□□□ 1.84
Pcdha11Q91Y19 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.53■■□□□ 1.84
Pcdha11Q91Y19 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdha11Q91Y19 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdha11Q91Y19 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
Pcdha11Q91Y19 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.84
Pcdha11Q91Y19 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdha11Q91Y19 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdha11Q91Y19 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdha11Q91Y19 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.49■■□□□ 1.83
Pcdha11Q91Y19 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdha11Q91Y19 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Pcdha11Q91Y19 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha11Q91Y19 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha11Q91Y19 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdha11Q91Y19 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdha11Q91Y19 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.44■■□□□ 1.82
Pcdha11Q91Y19 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.44■■□□□ 1.82
Pcdha11Q91Y19 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdha11Q91Y19 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdha11Q91Y19 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdha11Q91Y19 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdha11Q91Y19 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Pcdha11Q91Y19 Gm24970-201ENSMUST00000175582 82 ntBASIC26.42■■□□□ 1.82
Pcdha11Q91Y19 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.42■■□□□ 1.82
Pcdha11Q91Y19 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdha11Q91Y19 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdha11Q91Y19 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Pcdha11Q91Y19 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Pcdha11Q91Y19 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdha11Q91Y19 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
Pcdha11Q91Y19 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Pcdha11Q91Y19 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Pcdha11Q91Y19 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha11Q91Y19 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha11Q91Y19 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha11Q91Y19 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcdha11Q91Y19 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Pcdha11Q91Y19 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdha11Q91Y19 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.35■■□□□ 1.81
Pcdha11Q91Y19 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.34■■□□□ 1.81
Pcdha11Q91Y19 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdha11Q91Y19 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdha11Q91Y19 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdha11Q91Y19 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdha11Q91Y19 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdha11Q91Y19 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Pcdha11Q91Y19 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdha11Q91Y19 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.29■■□□□ 1.8
Pcdha11Q91Y19 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdha11Q91Y19 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Pcdha11Q91Y19 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms