Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdha9Q91Y11 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Pcdha9Q91Y11 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdha9Q91Y11 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdha9Q91Y11 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdha9Q91Y11 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdha9Q91Y11 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdha9Q91Y11 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdha9Q91Y11 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdha9Q91Y11 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdha9Q91Y11 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdha9Q91Y11 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Pcdha9Q91Y11 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha9Q91Y11 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Pcdha9Q91Y11 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha9Q91Y11 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdha9Q91Y11 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdha9Q91Y11 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.94
Pcdha9Q91Y11 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.14■■□□□ 1.93
Pcdha9Q91Y11 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha9Q91Y11 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.13■■□□□ 1.93
Pcdha9Q91Y11 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.12■■□□□ 1.93
Pcdha9Q91Y11 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdha9Q91Y11 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.11■■□□□ 1.93
Pcdha9Q91Y11 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdha9Q91Y11 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Pcdha9Q91Y11 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdha9Q91Y11 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdha9Q91Y11 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdha9Q91Y11 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha9Q91Y11 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Pcdha9Q91Y11 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha9Q91Y11 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdha9Q91Y11 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.06■■□□□ 1.92
Pcdha9Q91Y11 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Pcdha9Q91Y11 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdha9Q91Y11 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Pcdha9Q91Y11 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.04■■□□□ 1.92
Pcdha9Q91Y11 Zfp131-205ENSMUST00000223812 663 ntBASIC27.03■■□□□ 1.92
Pcdha9Q91Y11 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.92
Pcdha9Q91Y11 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha9Q91Y11 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha9Q91Y11 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdha9Q91Y11 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27■■□□□ 1.91
Pcdha9Q91Y11 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha9Q91Y11 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Pcdha9Q91Y11 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.97■■□□□ 1.91
Pcdha9Q91Y11 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdha9Q91Y11 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdha9Q91Y11 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdha9Q91Y11 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdha9Q91Y11 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha9Q91Y11 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Pcdha9Q91Y11 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdha9Q91Y11 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdha9Q91Y11 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdha9Q91Y11 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdha9Q91Y11 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdha9Q91Y11 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
Pcdha9Q91Y11 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.89■■□□□ 1.9
Pcdha9Q91Y11 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdha9Q91Y11 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdha9Q91Y11 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.87■■□□□ 1.89
Pcdha9Q91Y11 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdha9Q91Y11 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdha9Q91Y11 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdha9Q91Y11 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdha9Q91Y11 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdha9Q91Y11 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdha9Q91Y11 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.82■■□□□ 1.88
Pcdha9Q91Y11 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha9Q91Y11 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Pcdha9Q91Y11 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdha9Q91Y11 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdha9Q91Y11 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdha9Q91Y11 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Pcdha9Q91Y11 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.79■■□□□ 1.88
Pcdha9Q91Y11 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.79■■□□□ 1.88
Pcdha9Q91Y11 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha9Q91Y11 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha9Q91Y11 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha9Q91Y11 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha9Q91Y11 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Pcdha9Q91Y11 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdha9Q91Y11 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.76■■□□□ 1.87
Pcdha9Q91Y11 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdha9Q91Y11 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdha9Q91Y11 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdha9Q91Y11 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Pcdha9Q91Y11 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Pcdha9Q91Y11 Zxda-201ENSMUST00000117281 2621 ntBASIC26.72■■□□□ 1.87
Pcdha9Q91Y11 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdha9Q91Y11 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pcdha9Q91Y11 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.7■■□□□ 1.86
Pcdha9Q91Y11 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdha9Q91Y11 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdha9Q91Y11 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha9Q91Y11 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha9Q91Y11 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha9Q91Y11 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms