Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
StrcQ8VIM6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
StrcQ8VIM6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
StrcQ8VIM6 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.1■■■□□ 2.73
StrcQ8VIM6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
StrcQ8VIM6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.09■■■□□ 2.73
StrcQ8VIM6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
StrcQ8VIM6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
StrcQ8VIM6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
StrcQ8VIM6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
StrcQ8VIM6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
StrcQ8VIM6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
StrcQ8VIM6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
StrcQ8VIM6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
StrcQ8VIM6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
StrcQ8VIM6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
StrcQ8VIM6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
StrcQ8VIM6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
StrcQ8VIM6 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.97■■■□□ 2.71
StrcQ8VIM6 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.96■■■□□ 2.71
StrcQ8VIM6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
StrcQ8VIM6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
StrcQ8VIM6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
StrcQ8VIM6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
StrcQ8VIM6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
StrcQ8VIM6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
StrcQ8VIM6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
StrcQ8VIM6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
StrcQ8VIM6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
StrcQ8VIM6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
StrcQ8VIM6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
StrcQ8VIM6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
StrcQ8VIM6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.85■■■□□ 2.69
StrcQ8VIM6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
StrcQ8VIM6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.84■■■□□ 2.69
StrcQ8VIM6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
StrcQ8VIM6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.79■■■□□ 2.68
StrcQ8VIM6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
StrcQ8VIM6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
StrcQ8VIM6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
StrcQ8VIM6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.75■■■□□ 2.67
StrcQ8VIM6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
StrcQ8VIM6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
StrcQ8VIM6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
StrcQ8VIM6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
StrcQ8VIM6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
StrcQ8VIM6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
StrcQ8VIM6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
StrcQ8VIM6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
StrcQ8VIM6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
StrcQ8VIM6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
StrcQ8VIM6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
StrcQ8VIM6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
StrcQ8VIM6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
StrcQ8VIM6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
StrcQ8VIM6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.61■■■□□ 2.65
StrcQ8VIM6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.59■■■□□ 2.65
StrcQ8VIM6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
StrcQ8VIM6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.58■■■□□ 2.65
StrcQ8VIM6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
StrcQ8VIM6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.56■■■□□ 2.64
StrcQ8VIM6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.56■■■□□ 2.64
StrcQ8VIM6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
StrcQ8VIM6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
StrcQ8VIM6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
StrcQ8VIM6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
StrcQ8VIM6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
StrcQ8VIM6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
StrcQ8VIM6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
StrcQ8VIM6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
StrcQ8VIM6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.5■■■□□ 2.63
StrcQ8VIM6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.5■■■□□ 2.63
StrcQ8VIM6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.49■■■□□ 2.63
StrcQ8VIM6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
StrcQ8VIM6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
StrcQ8VIM6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
StrcQ8VIM6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
StrcQ8VIM6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
StrcQ8VIM6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
StrcQ8VIM6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
StrcQ8VIM6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
StrcQ8VIM6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
StrcQ8VIM6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.43■■■□□ 2.62
StrcQ8VIM6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
StrcQ8VIM6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
StrcQ8VIM6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
StrcQ8VIM6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
StrcQ8VIM6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.4■■■□□ 2.62
StrcQ8VIM6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
StrcQ8VIM6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.38■■■□□ 2.61
StrcQ8VIM6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
StrcQ8VIM6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
StrcQ8VIM6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
StrcQ8VIM6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
StrcQ8VIM6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
StrcQ8VIM6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
StrcQ8VIM6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
StrcQ8VIM6 Nkain2-201ENSMUST00000092602 558 ntBASIC31.36■■■□□ 2.61
StrcQ8VIM6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
StrcQ8VIM6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.35■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms