Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.16■■□□□ 1.78
Ttc39cQ8VE09 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ttc39cQ8VE09 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ttc39cQ8VE09 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Ttc39cQ8VE09 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ttc39cQ8VE09 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ttc39cQ8VE09 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ttc39cQ8VE09 Gm45855-201ENSMUST00000212546 880 ntBASIC26.11■■□□□ 1.77
Ttc39cQ8VE09 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ttc39cQ8VE09 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ttc39cQ8VE09 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Ttc39cQ8VE09 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.06■■□□□ 1.76
Ttc39cQ8VE09 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ttc39cQ8VE09 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Ttc39cQ8VE09 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.05■■□□□ 1.76
Ttc39cQ8VE09 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Ttc39cQ8VE09 Gm9397-201ENSMUST00000200125 605 ntBASIC26.05■■□□□ 1.76
Ttc39cQ8VE09 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ttc39cQ8VE09 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ttc39cQ8VE09 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ttc39cQ8VE09 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ttc39cQ8VE09 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
Ttc39cQ8VE09 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ttc39cQ8VE09 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ttc39cQ8VE09 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ttc39cQ8VE09 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ttc39cQ8VE09 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ttc39cQ8VE09 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.01■■□□□ 1.75
Ttc39cQ8VE09 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ttc39cQ8VE09 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ttc39cQ8VE09 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26■■□□□ 1.75
Ttc39cQ8VE09 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Ttc39cQ8VE09 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26■■□□□ 1.75
Ttc39cQ8VE09 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ttc39cQ8VE09 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ttc39cQ8VE09 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ttc39cQ8VE09 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Ttc39cQ8VE09 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ttc39cQ8VE09 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ttc39cQ8VE09 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ttc39cQ8VE09 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.97■■□□□ 1.75
Ttc39cQ8VE09 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.97■■□□□ 1.75
Ttc39cQ8VE09 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
Ttc39cQ8VE09 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ttc39cQ8VE09 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ttc39cQ8VE09 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Ttc39cQ8VE09 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ttc39cQ8VE09 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.94■■□□□ 1.74
Ttc39cQ8VE09 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.92■■□□□ 1.74
Ttc39cQ8VE09 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ttc39cQ8VE09 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ttc39cQ8VE09 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Ttc39cQ8VE09 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ttc39cQ8VE09 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ttc39cQ8VE09 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ttc39cQ8VE09 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ttc39cQ8VE09 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ttc39cQ8VE09 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.88■■□□□ 1.73
Ttc39cQ8VE09 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ttc39cQ8VE09 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ttc39cQ8VE09 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.87■■□□□ 1.73
Ttc39cQ8VE09 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ttc39cQ8VE09 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.84■■□□□ 1.73
Ttc39cQ8VE09 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ttc39cQ8VE09 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ttc39cQ8VE09 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ttc39cQ8VE09 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ttc39cQ8VE09 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.82■■□□□ 1.72
Ttc39cQ8VE09 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ttc39cQ8VE09 Gm24970-201ENSMUST00000175582 82 ntBASIC25.82■■□□□ 1.72
Ttc39cQ8VE09 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.82■■□□□ 1.72
Ttc39cQ8VE09 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ttc39cQ8VE09 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ttc39cQ8VE09 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ttc39cQ8VE09 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.81■■□□□ 1.72
Ttc39cQ8VE09 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
Ttc39cQ8VE09 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ttc39cQ8VE09 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Ttc39cQ8VE09 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ttc39cQ8VE09 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.78■■□□□ 1.72
Ttc39cQ8VE09 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ttc39cQ8VE09 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.74■■□□□ 1.71
Ttc39cQ8VE09 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ttc39cQ8VE09 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
Ttc39cQ8VE09 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ttc39cQ8VE09 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ttc39cQ8VE09 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ttc39cQ8VE09 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ttc39cQ8VE09 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ttc39cQ8VE09 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Ttc39cQ8VE09 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ttc39cQ8VE09 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ttc39cQ8VE09 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ttc39cQ8VE09 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ttc39cQ8VE09 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.67■■□□□ 1.7
Ttc39cQ8VE09 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Ttc39cQ8VE09 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ttc39cQ8VE09 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.65■■□□□ 1.7
Ttc39cQ8VE09 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.64■■□□□ 1.69
Ttc39cQ8VE09 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms