Protein–RNA interactions for Protein: Q8VCM8

Ncln, Nicalin, mousemouse

Known RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclnQ8VCM8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
NclnQ8VCM8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NclnQ8VCM8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NclnQ8VCM8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NclnQ8VCM8 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.4■■□□□ 1.5
NclnQ8VCM8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.38■■□□□ 1.49
NclnQ8VCM8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NclnQ8VCM8 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.36■■□□□ 1.49
NclnQ8VCM8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
NclnQ8VCM8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NclnQ8VCM8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NclnQ8VCM8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NclnQ8VCM8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
NclnQ8VCM8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NclnQ8VCM8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
NclnQ8VCM8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NclnQ8VCM8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NclnQ8VCM8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
NclnQ8VCM8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclnQ8VCM8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclnQ8VCM8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.26■■□□□ 1.47
NclnQ8VCM8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
NclnQ8VCM8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclnQ8VCM8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NclnQ8VCM8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclnQ8VCM8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclnQ8VCM8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclnQ8VCM8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NclnQ8VCM8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NclnQ8VCM8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
NclnQ8VCM8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NclnQ8VCM8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NclnQ8VCM8 Gm45855-201ENSMUST00000212546 880 ntBASIC24.19■■□□□ 1.46
NclnQ8VCM8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NclnQ8VCM8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NclnQ8VCM8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
NclnQ8VCM8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NclnQ8VCM8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.18■■□□□ 1.46
NclnQ8VCM8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
NclnQ8VCM8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
NclnQ8VCM8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
NclnQ8VCM8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NclnQ8VCM8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NclnQ8VCM8 Gm9397-201ENSMUST00000200125 605 ntBASIC24.14■■□□□ 1.45
NclnQ8VCM8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NclnQ8VCM8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NclnQ8VCM8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
NclnQ8VCM8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.11■■□□□ 1.45
NclnQ8VCM8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
NclnQ8VCM8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.11■■□□□ 1.45
NclnQ8VCM8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclnQ8VCM8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NclnQ8VCM8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.1■■□□□ 1.45
NclnQ8VCM8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.1■■□□□ 1.45
NclnQ8VCM8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclnQ8VCM8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclnQ8VCM8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclnQ8VCM8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclnQ8VCM8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.09■■□□□ 1.45
NclnQ8VCM8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.09■■□□□ 1.45
NclnQ8VCM8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NclnQ8VCM8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NclnQ8VCM8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NclnQ8VCM8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NclnQ8VCM8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NclnQ8VCM8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
NclnQ8VCM8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NclnQ8VCM8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.02■■□□□ 1.44
NclnQ8VCM8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NclnQ8VCM8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
NclnQ8VCM8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NclnQ8VCM8 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.99■■□□□ 1.43
NclnQ8VCM8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NclnQ8VCM8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NclnQ8VCM8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NclnQ8VCM8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
NclnQ8VCM8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.96■■□□□ 1.43
NclnQ8VCM8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclnQ8VCM8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
NclnQ8VCM8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.43
NclnQ8VCM8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.94■■□□□ 1.42
NclnQ8VCM8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclnQ8VCM8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclnQ8VCM8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
NclnQ8VCM8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclnQ8VCM8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.93■■□□□ 1.42
NclnQ8VCM8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclnQ8VCM8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NclnQ8VCM8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NclnQ8VCM8 Gm24970-201ENSMUST00000175582 82 ntBASIC23.92■■□□□ 1.42
NclnQ8VCM8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NclnQ8VCM8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.91■■□□□ 1.42
NclnQ8VCM8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NclnQ8VCM8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NclnQ8VCM8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NclnQ8VCM8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NclnQ8VCM8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NclnQ8VCM8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NclnQ8VCM8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NclnQ8VCM8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms