Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh3kbp1Q8R550 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh3kbp1Q8R550 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Sh3kbp1Q8R550 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Sh3kbp1Q8R550 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3kbp1Q8R550 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3kbp1Q8R550 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.02■■□□□ 1.76
Sh3kbp1Q8R550 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Sh3kbp1Q8R550 Gm9397-201ENSMUST00000200125 605 ntBASIC26■■□□□ 1.75
Sh3kbp1Q8R550 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sh3kbp1Q8R550 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3kbp1Q8R550 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3kbp1Q8R550 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3kbp1Q8R550 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.97■■□□□ 1.75
Sh3kbp1Q8R550 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3kbp1Q8R550 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Sh3kbp1Q8R550 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sh3kbp1Q8R550 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.93■■□□□ 1.74
Sh3kbp1Q8R550 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sh3kbp1Q8R550 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
Sh3kbp1Q8R550 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3kbp1Q8R550 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.91■■□□□ 1.74
Sh3kbp1Q8R550 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Sh3kbp1Q8R550 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sh3kbp1Q8R550 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.89■■□□□ 1.74
Sh3kbp1Q8R550 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.89■■□□□ 1.74
Sh3kbp1Q8R550 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.89■■□□□ 1.74
Sh3kbp1Q8R550 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
Sh3kbp1Q8R550 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Sh3kbp1Q8R550 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sh3kbp1Q8R550 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3kbp1Q8R550 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3kbp1Q8R550 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3kbp1Q8R550 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sh3kbp1Q8R550 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh3kbp1Q8R550 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh3kbp1Q8R550 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
Sh3kbp1Q8R550 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sh3kbp1Q8R550 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Sh3kbp1Q8R550 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Sh3kbp1Q8R550 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.78■■□□□ 1.72
Sh3kbp1Q8R550 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3kbp1Q8R550 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.76■■□□□ 1.71
Sh3kbp1Q8R550 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3kbp1Q8R550 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
Sh3kbp1Q8R550 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.74■■□□□ 1.71
Sh3kbp1Q8R550 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sh3kbp1Q8R550 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3kbp1Q8R550 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3kbp1Q8R550 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3kbp1Q8R550 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3kbp1Q8R550 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Sh3kbp1Q8R550 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3kbp1Q8R550 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3kbp1Q8R550 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sh3kbp1Q8R550 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.68■■□□□ 1.7
Sh3kbp1Q8R550 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.67■■□□□ 1.7
Sh3kbp1Q8R550 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Sh3kbp1Q8R550 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3kbp1Q8R550 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Gm24970-201ENSMUST00000175582 82 ntBASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3kbp1Q8R550 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Sh3kbp1Q8R550 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sh3kbp1Q8R550 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sh3kbp1Q8R550 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.57■■□□□ 1.68
Sh3kbp1Q8R550 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sh3kbp1Q8R550 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.56■■□□□ 1.68
Sh3kbp1Q8R550 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Sh3kbp1Q8R550 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh3kbp1Q8R550 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Sh3kbp1Q8R550 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms