Protein–RNA interactions for Protein: Q8R3H9

Ttc4, Tetratricopeptide repeat protein 4, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc4Q8R3H9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ttc4Q8R3H9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ttc4Q8R3H9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ttc4Q8R3H9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ttc4Q8R3H9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ttc4Q8R3H9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ttc4Q8R3H9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ttc4Q8R3H9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Ttc4Q8R3H9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ttc4Q8R3H9 Amer2-203ENSMUST00000225247 2662 ntBASIC23.2■■□□□ 1.3
Ttc4Q8R3H9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
Ttc4Q8R3H9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Ttc4Q8R3H9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ttc4Q8R3H9 Gm25238-201ENSMUST00000174914 89 ntBASIC23.19■■□□□ 1.3
Ttc4Q8R3H9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc4Q8R3H9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Ttc4Q8R3H9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ttc4Q8R3H9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc4Q8R3H9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc4Q8R3H9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ttc4Q8R3H9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ttc4Q8R3H9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc4Q8R3H9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc4Q8R3H9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc4Q8R3H9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc4Q8R3H9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc4Q8R3H9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.11■■□□□ 1.29
Ttc4Q8R3H9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.11■■□□□ 1.29
Ttc4Q8R3H9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ttc4Q8R3H9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Ttc4Q8R3H9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.08■■□□□ 1.29
Ttc4Q8R3H9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc4Q8R3H9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.06■■□□□ 1.28
Ttc4Q8R3H9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc4Q8R3H9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ttc4Q8R3H9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc4Q8R3H9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ttc4Q8R3H9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ttc4Q8R3H9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.03■■□□□ 1.28
Ttc4Q8R3H9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ttc4Q8R3H9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.02■■□□□ 1.28
Ttc4Q8R3H9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ttc4Q8R3H9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ttc4Q8R3H9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc4Q8R3H9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc4Q8R3H9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ttc4Q8R3H9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc4Q8R3H9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ttc4Q8R3H9 Mipep-204ENSMUST00000225043 1548 ntBASIC23■■□□□ 1.27
Ttc4Q8R3H9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Ttc4Q8R3H9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc4Q8R3H9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc4Q8R3H9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc4Q8R3H9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc4Q8R3H9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.97■■□□□ 1.27
Ttc4Q8R3H9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc4Q8R3H9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc4Q8R3H9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc4Q8R3H9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc4Q8R3H9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc4Q8R3H9 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.96■■□□□ 1.27
Ttc4Q8R3H9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ttc4Q8R3H9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Ttc4Q8R3H9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ttc4Q8R3H9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc4Q8R3H9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc4Q8R3H9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc4Q8R3H9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc4Q8R3H9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.93■■□□□ 1.26
Ttc4Q8R3H9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Ttc4Q8R3H9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Ttc4Q8R3H9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc4Q8R3H9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc4Q8R3H9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ttc4Q8R3H9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ttc4Q8R3H9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ttc4Q8R3H9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ttc4Q8R3H9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ttc4Q8R3H9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
Ttc4Q8R3H9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
Ttc4Q8R3H9 Rab21-202ENSMUST00000218831 843 ntBASIC22.87■■□□□ 1.25
Ttc4Q8R3H9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ttc4Q8R3H9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ttc4Q8R3H9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.85■■□□□ 1.25
Ttc4Q8R3H9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ttc4Q8R3H9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ttc4Q8R3H9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Ttc4Q8R3H9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
Ttc4Q8R3H9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ttc4Q8R3H9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.81■■□□□ 1.24
Ttc4Q8R3H9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ttc4Q8R3H9 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.79■■□□□ 1.24
Ttc4Q8R3H9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ttc4Q8R3H9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ttc4Q8R3H9 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.78■■□□□ 1.24
Ttc4Q8R3H9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ttc4Q8R3H9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ttc4Q8R3H9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ttc4Q8R3H9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
Ttc4Q8R3H9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms