Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.39■■□□□ 1.33
Vmn1r28Q8R2C9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Vmn1r28Q8R2C9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Vmn1r28Q8R2C9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Vmn1r28Q8R2C9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Vmn1r28Q8R2C9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vmn1r28Q8R2C9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Vmn1r28Q8R2C9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vmn1r28Q8R2C9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Vmn1r28Q8R2C9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Vmn1r28Q8R2C9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Vmn1r28Q8R2C9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Vmn1r28Q8R2C9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Vmn1r28Q8R2C9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Vmn1r28Q8R2C9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Vmn1r28Q8R2C9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vmn1r28Q8R2C9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.26■■□□□ 1.31
Vmn1r28Q8R2C9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vmn1r28Q8R2C9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Vmn1r28Q8R2C9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vmn1r28Q8R2C9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vmn1r28Q8R2C9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r28Q8R2C9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Vmn1r28Q8R2C9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Vmn1r28Q8R2C9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Vmn1r28Q8R2C9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Vmn1r28Q8R2C9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
Vmn1r28Q8R2C9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vmn1r28Q8R2C9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vmn1r28Q8R2C9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vmn1r28Q8R2C9 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.18■■□□□ 1.3
Vmn1r28Q8R2C9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vmn1r28Q8R2C9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vmn1r28Q8R2C9 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.15■■□□□ 1.3
Vmn1r28Q8R2C9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r28Q8R2C9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r28Q8R2C9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.13■■□□□ 1.29
Vmn1r28Q8R2C9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r28Q8R2C9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r28Q8R2C9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r28Q8R2C9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r28Q8R2C9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Vmn1r28Q8R2C9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vmn1r28Q8R2C9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vmn1r28Q8R2C9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vmn1r28Q8R2C9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vmn1r28Q8R2C9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vmn1r28Q8R2C9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vmn1r28Q8R2C9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.09■■□□□ 1.29
Vmn1r28Q8R2C9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
Vmn1r28Q8R2C9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r28Q8R2C9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r28Q8R2C9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.07■■□□□ 1.28
Vmn1r28Q8R2C9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Vmn1r28Q8R2C9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vmn1r28Q8R2C9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vmn1r28Q8R2C9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Vmn1r28Q8R2C9 Gm45855-201ENSMUST00000212546 880 ntBASIC23.04■■□□□ 1.28
Vmn1r28Q8R2C9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Vmn1r28Q8R2C9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r28Q8R2C9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.01■■□□□ 1.27
Vmn1r28Q8R2C9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r28Q8R2C9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.01■■□□□ 1.27
Vmn1r28Q8R2C9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.01■■□□□ 1.27
Vmn1r28Q8R2C9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Vmn1r28Q8R2C9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r28Q8R2C9 Gm9397-201ENSMUST00000200125 605 ntBASIC23■■□□□ 1.27
Vmn1r28Q8R2C9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.99■■□□□ 1.27
Vmn1r28Q8R2C9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Vmn1r28Q8R2C9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r28Q8R2C9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r28Q8R2C9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r28Q8R2C9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r28Q8R2C9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r28Q8R2C9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vmn1r28Q8R2C9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.94■■□□□ 1.26
Vmn1r28Q8R2C9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Vmn1r28Q8R2C9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r28Q8R2C9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Vmn1r28Q8R2C9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r28Q8R2C9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r28Q8R2C9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r28Q8R2C9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.93■■□□□ 1.26
Vmn1r28Q8R2C9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vmn1r28Q8R2C9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vmn1r28Q8R2C9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Vmn1r28Q8R2C9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Vmn1r28Q8R2C9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Vmn1r28Q8R2C9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vmn1r28Q8R2C9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vmn1r28Q8R2C9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Vmn1r28Q8R2C9 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.87■■□□□ 1.25
Vmn1r28Q8R2C9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r28Q8R2C9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vmn1r28Q8R2C9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.86■■□□□ 1.25
Vmn1r28Q8R2C9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.86■■□□□ 1.25
Vmn1r28Q8R2C9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vmn1r28Q8R2C9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vmn1r28Q8R2C9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Vmn1r28Q8R2C9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms