Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vmn1r228Q8R2A7 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.77■■□□□ 1.08
Vmn1r228Q8R2A7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vmn1r228Q8R2A7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.77■■□□□ 1.07
Vmn1r228Q8R2A7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r228Q8R2A7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.76■■□□□ 1.07
Vmn1r228Q8R2A7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r228Q8R2A7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Vmn1r228Q8R2A7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r228Q8R2A7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r228Q8R2A7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Vmn1r228Q8R2A7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r228Q8R2A7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r228Q8R2A7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r228Q8R2A7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r228Q8R2A7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r228Q8R2A7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Vmn1r228Q8R2A7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Vmn1r228Q8R2A7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r228Q8R2A7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r228Q8R2A7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Vmn1r228Q8R2A7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r228Q8R2A7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r228Q8R2A7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r228Q8R2A7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r228Q8R2A7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r228Q8R2A7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r228Q8R2A7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r228Q8R2A7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r228Q8R2A7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r228Q8R2A7 Rab21-202ENSMUST00000218831 843 ntBASIC21.63■■□□□ 1.05
Vmn1r228Q8R2A7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Vmn1r228Q8R2A7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r228Q8R2A7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r228Q8R2A7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r228Q8R2A7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.62■■□□□ 1.05
Vmn1r228Q8R2A7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r228Q8R2A7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r228Q8R2A7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r228Q8R2A7 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.61■■□□□ 1.05
Vmn1r228Q8R2A7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r228Q8R2A7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.59■■□□□ 1.05
Vmn1r228Q8R2A7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r228Q8R2A7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r228Q8R2A7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r228Q8R2A7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Vmn1r228Q8R2A7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Vmn1r228Q8R2A7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r228Q8R2A7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r228Q8R2A7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r228Q8R2A7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r228Q8R2A7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r228Q8R2A7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r228Q8R2A7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r228Q8R2A7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r228Q8R2A7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r228Q8R2A7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Vmn1r228Q8R2A7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r228Q8R2A7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.52■■□□□ 1.04
Vmn1r228Q8R2A7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r228Q8R2A7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r228Q8R2A7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r228Q8R2A7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r228Q8R2A7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.49■■□□□ 1.03
Vmn1r228Q8R2A7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Vmn1r228Q8R2A7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r228Q8R2A7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vmn1r228Q8R2A7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.48■■□□□ 1.03
Vmn1r228Q8R2A7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.48■■□□□ 1.03
Vmn1r228Q8R2A7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r228Q8R2A7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r228Q8R2A7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Vmn1r228Q8R2A7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r228Q8R2A7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vmn1r228Q8R2A7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r228Q8R2A7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r228Q8R2A7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r228Q8R2A7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r228Q8R2A7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Vmn1r228Q8R2A7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r228Q8R2A7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.43■■□□□ 1.02
Vmn1r228Q8R2A7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r228Q8R2A7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Vmn1r228Q8R2A7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r228Q8R2A7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.41■■□□□ 1.02
Vmn1r228Q8R2A7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r228Q8R2A7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r228Q8R2A7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Vmn1r228Q8R2A7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Vmn1r228Q8R2A7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r228Q8R2A7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r228Q8R2A7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r228Q8R2A7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r228Q8R2A7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r228Q8R2A7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r228Q8R2A7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r228Q8R2A7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r228Q8R2A7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r228Q8R2A7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r228Q8R2A7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms