Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.4■■□□□ 1.66
Zcchc9Q8R1J3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.39■■□□□ 1.65
Zcchc9Q8R1J3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Zcchc9Q8R1J3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Zcchc9Q8R1J3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.35■■□□□ 1.65
Zcchc9Q8R1J3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Zcchc9Q8R1J3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Zcchc9Q8R1J3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Zcchc9Q8R1J3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.28■■□□□ 1.64
Zcchc9Q8R1J3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Zcchc9Q8R1J3 Gm24970-201ENSMUST00000175582 82 ntBASIC25.26■■□□□ 1.63
Zcchc9Q8R1J3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.25■■□□□ 1.63
Zcchc9Q8R1J3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Zcchc9Q8R1J3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Zcchc9Q8R1J3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Zcchc9Q8R1J3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Zcchc9Q8R1J3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Zcchc9Q8R1J3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.22■■□□□ 1.63
Zcchc9Q8R1J3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.21■■□□□ 1.63
Zcchc9Q8R1J3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
Zcchc9Q8R1J3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Zcchc9Q8R1J3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Zcchc9Q8R1J3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Zcchc9Q8R1J3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Zcchc9Q8R1J3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Zcchc9Q8R1J3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Zcchc9Q8R1J3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Zcchc9Q8R1J3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Zcchc9Q8R1J3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Zcchc9Q8R1J3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Zcchc9Q8R1J3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Zcchc9Q8R1J3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Zcchc9Q8R1J3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.11■■□□□ 1.61
Zcchc9Q8R1J3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
Zcchc9Q8R1J3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Zcchc9Q8R1J3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.09■■□□□ 1.61
Zcchc9Q8R1J3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Zcchc9Q8R1J3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Zcchc9Q8R1J3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Zcchc9Q8R1J3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Zcchc9Q8R1J3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.07■■□□□ 1.6
Zcchc9Q8R1J3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Zcchc9Q8R1J3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
Zcchc9Q8R1J3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.06■■□□□ 1.6
Zcchc9Q8R1J3 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.05■■□□□ 1.6
Zcchc9Q8R1J3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Zcchc9Q8R1J3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.05■■□□□ 1.6
Zcchc9Q8R1J3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Zcchc9Q8R1J3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.04■■□□□ 1.6
Zcchc9Q8R1J3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Zcchc9Q8R1J3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Zcchc9Q8R1J3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Zcchc9Q8R1J3 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.03■■□□□ 1.6
Zcchc9Q8R1J3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Zcchc9Q8R1J3 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.98■■□□□ 1.59
Zcchc9Q8R1J3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Zcchc9Q8R1J3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Zcchc9Q8R1J3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Zcchc9Q8R1J3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
Zcchc9Q8R1J3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Zcchc9Q8R1J3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Zcchc9Q8R1J3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Zcchc9Q8R1J3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Zcchc9Q8R1J3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.91■■□□□ 1.58
Zcchc9Q8R1J3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Zcchc9Q8R1J3 Gm6821-201ENSMUST00000107540 542 ntBASIC24.9■■□□□ 1.58
Zcchc9Q8R1J3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Zcchc9Q8R1J3 Gm8503-201ENSMUST00000118131 455 ntBASIC24.89■■□□□ 1.58
Zcchc9Q8R1J3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Zcchc9Q8R1J3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.87■■□□□ 1.57
Zcchc9Q8R1J3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Zcchc9Q8R1J3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Zcchc9Q8R1J3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Zcchc9Q8R1J3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Zcchc9Q8R1J3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Zcchc9Q8R1J3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Zcchc9Q8R1J3 Zxda-201ENSMUST00000117281 2621 ntBASIC24.84■■□□□ 1.57
Zcchc9Q8R1J3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Zcchc9Q8R1J3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Zcchc9Q8R1J3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Zcchc9Q8R1J3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Zcchc9Q8R1J3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Zcchc9Q8R1J3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Zcchc9Q8R1J3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.81■■□□□ 1.56
Zcchc9Q8R1J3 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.79■■□□□ 1.56
Zcchc9Q8R1J3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Zcchc9Q8R1J3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Zcchc9Q8R1J3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Zcchc9Q8R1J3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Zcchc9Q8R1J3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Zcchc9Q8R1J3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Zcchc9Q8R1J3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Zcchc9Q8R1J3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.76■■□□□ 1.55
Zcchc9Q8R1J3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Zcchc9Q8R1J3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.75■■□□□ 1.55
Zcchc9Q8R1J3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Zcchc9Q8R1J3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Zcchc9Q8R1J3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Zcchc9Q8R1J3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Zcchc9Q8R1J3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms