Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Depdc1aQ8CIG0 Gm45855-201ENSMUST00000212546 880 ntBASIC29.28■■■□□ 2.28
Depdc1aQ8CIG0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.28■■■□□ 2.28
Depdc1aQ8CIG0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Depdc1aQ8CIG0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Depdc1aQ8CIG0 Gm9397-201ENSMUST00000200125 605 ntBASIC29.27■■■□□ 2.28
Depdc1aQ8CIG0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Depdc1aQ8CIG0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Depdc1aQ8CIG0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
Depdc1aQ8CIG0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.26■■■□□ 2.27
Depdc1aQ8CIG0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Depdc1aQ8CIG0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Depdc1aQ8CIG0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Depdc1aQ8CIG0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Depdc1aQ8CIG0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.25■■■□□ 2.27
Depdc1aQ8CIG0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Depdc1aQ8CIG0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.2■■■□□ 2.27
Depdc1aQ8CIG0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
Depdc1aQ8CIG0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.2■■■□□ 2.26
Depdc1aQ8CIG0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.19■■■□□ 2.26
Depdc1aQ8CIG0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.19■■■□□ 2.26
Depdc1aQ8CIG0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Depdc1aQ8CIG0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Depdc1aQ8CIG0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Depdc1aQ8CIG0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Depdc1aQ8CIG0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Depdc1aQ8CIG0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Depdc1aQ8CIG0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Depdc1aQ8CIG0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.13■■■□□ 2.25
Depdc1aQ8CIG0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Depdc1aQ8CIG0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Depdc1aQ8CIG0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Depdc1aQ8CIG0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Depdc1aQ8CIG0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Depdc1aQ8CIG0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.08■■■□□ 2.25
Depdc1aQ8CIG0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
Depdc1aQ8CIG0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.07■■■□□ 2.24
Depdc1aQ8CIG0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Depdc1aQ8CIG0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.04■■■□□ 2.24
Depdc1aQ8CIG0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Depdc1aQ8CIG0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.03■■■□□ 2.24
Depdc1aQ8CIG0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Depdc1aQ8CIG0 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.02■■■□□ 2.24
Depdc1aQ8CIG0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Depdc1aQ8CIG0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29■■■□□ 2.23
Depdc1aQ8CIG0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.99■■■□□ 2.23
Depdc1aQ8CIG0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Depdc1aQ8CIG0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Depdc1aQ8CIG0 Gm24970-201ENSMUST00000175582 82 ntBASIC28.98■■■□□ 2.23
Depdc1aQ8CIG0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Depdc1aQ8CIG0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Depdc1aQ8CIG0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Depdc1aQ8CIG0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Depdc1aQ8CIG0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Depdc1aQ8CIG0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Depdc1aQ8CIG0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.91■■■□□ 2.22
Depdc1aQ8CIG0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Depdc1aQ8CIG0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Depdc1aQ8CIG0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Depdc1aQ8CIG0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Depdc1aQ8CIG0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.9■■■□□ 2.22
Depdc1aQ8CIG0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Depdc1aQ8CIG0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
Depdc1aQ8CIG0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Depdc1aQ8CIG0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.9■■■□□ 2.22
Depdc1aQ8CIG0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
Depdc1aQ8CIG0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Depdc1aQ8CIG0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Depdc1aQ8CIG0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Depdc1aQ8CIG0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Depdc1aQ8CIG0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
Depdc1aQ8CIG0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Depdc1aQ8CIG0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Depdc1aQ8CIG0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Depdc1aQ8CIG0 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.82■■■□□ 2.2
Depdc1aQ8CIG0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Depdc1aQ8CIG0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Depdc1aQ8CIG0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Depdc1aQ8CIG0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Depdc1aQ8CIG0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Depdc1aQ8CIG0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.77■■■□□ 2.2
Depdc1aQ8CIG0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Depdc1aQ8CIG0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Depdc1aQ8CIG0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Depdc1aQ8CIG0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Depdc1aQ8CIG0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Depdc1aQ8CIG0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Depdc1aQ8CIG0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Depdc1aQ8CIG0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Depdc1aQ8CIG0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.72■■■□□ 2.19
Depdc1aQ8CIG0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Depdc1aQ8CIG0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.7■■■□□ 2.19
Depdc1aQ8CIG0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.19
Depdc1aQ8CIG0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Depdc1aQ8CIG0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.7■■■□□ 2.18
Depdc1aQ8CIG0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Depdc1aQ8CIG0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Depdc1aQ8CIG0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.68■■■□□ 2.18
Depdc1aQ8CIG0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Depdc1aQ8CIG0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms