Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rdh1Q8CGV4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.03■■□□□ 1.6
Rdh1Q8CGV4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Rdh1Q8CGV4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rdh1Q8CGV4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Rdh1Q8CGV4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rdh1Q8CGV4 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.02■■□□□ 1.6
Rdh1Q8CGV4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rdh1Q8CGV4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rdh1Q8CGV4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.02■■□□□ 1.6
Rdh1Q8CGV4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Rdh1Q8CGV4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rdh1Q8CGV4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25■■□□□ 1.59
Rdh1Q8CGV4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25■■□□□ 1.59
Rdh1Q8CGV4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Rdh1Q8CGV4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Rdh1Q8CGV4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rdh1Q8CGV4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rdh1Q8CGV4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rdh1Q8CGV4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rdh1Q8CGV4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Rdh1Q8CGV4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rdh1Q8CGV4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rdh1Q8CGV4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rdh1Q8CGV4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Rdh1Q8CGV4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Rdh1Q8CGV4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rdh1Q8CGV4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rdh1Q8CGV4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.94■■□□□ 1.58
Rdh1Q8CGV4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.94■■□□□ 1.58
Rdh1Q8CGV4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Rdh1Q8CGV4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rdh1Q8CGV4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.92■■□□□ 1.58
Rdh1Q8CGV4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rdh1Q8CGV4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rdh1Q8CGV4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.91■■□□□ 1.58
Rdh1Q8CGV4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rdh1Q8CGV4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
Rdh1Q8CGV4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.84■■□□□ 1.57
Rdh1Q8CGV4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rdh1Q8CGV4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.83■■□□□ 1.57
Rdh1Q8CGV4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.83■■□□□ 1.57
Rdh1Q8CGV4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rdh1Q8CGV4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rdh1Q8CGV4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rdh1Q8CGV4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rdh1Q8CGV4 Gm24970-201ENSMUST00000175582 82 ntBASIC24.8■■□□□ 1.56
Rdh1Q8CGV4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.8■■□□□ 1.56
Rdh1Q8CGV4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rdh1Q8CGV4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Rdh1Q8CGV4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rdh1Q8CGV4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rdh1Q8CGV4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rdh1Q8CGV4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rdh1Q8CGV4 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.75■■□□□ 1.55
Rdh1Q8CGV4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Rdh1Q8CGV4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rdh1Q8CGV4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rdh1Q8CGV4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Rdh1Q8CGV4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rdh1Q8CGV4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rdh1Q8CGV4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rdh1Q8CGV4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rdh1Q8CGV4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Rdh1Q8CGV4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rdh1Q8CGV4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rdh1Q8CGV4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rdh1Q8CGV4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.7■■□□□ 1.55
Rdh1Q8CGV4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rdh1Q8CGV4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Rdh1Q8CGV4 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.68■■□□□ 1.54
Rdh1Q8CGV4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Rdh1Q8CGV4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.65■■□□□ 1.54
Rdh1Q8CGV4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rdh1Q8CGV4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rdh1Q8CGV4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rdh1Q8CGV4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rdh1Q8CGV4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rdh1Q8CGV4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Rdh1Q8CGV4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rdh1Q8CGV4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rdh1Q8CGV4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rdh1Q8CGV4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rdh1Q8CGV4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Rdh1Q8CGV4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.58■■□□□ 1.53
Rdh1Q8CGV4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Rdh1Q8CGV4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rdh1Q8CGV4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Rdh1Q8CGV4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rdh1Q8CGV4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rdh1Q8CGV4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.54■■□□□ 1.52
Rdh1Q8CGV4 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.53■■□□□ 1.52
Rdh1Q8CGV4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.53■■□□□ 1.52
Rdh1Q8CGV4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.53■■□□□ 1.52
Rdh1Q8CGV4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rdh1Q8CGV4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rdh1Q8CGV4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Rdh1Q8CGV4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
Rdh1Q8CGV4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rdh1Q8CGV4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms