Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Rbm28Q8CGC6 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.08■■■□□ 2.41
Rbm28Q8CGC6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rbm28Q8CGC6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rbm28Q8CGC6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.06■■■□□ 2.4
Rbm28Q8CGC6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.05■■■□□ 2.4
Rbm28Q8CGC6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Rbm28Q8CGC6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.05■■■□□ 2.4
Rbm28Q8CGC6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Rbm28Q8CGC6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Rbm28Q8CGC6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rbm28Q8CGC6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
Rbm28Q8CGC6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30■■■□□ 2.39
Rbm28Q8CGC6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Rbm28Q8CGC6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rbm28Q8CGC6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Rbm28Q8CGC6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rbm28Q8CGC6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rbm28Q8CGC6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.93■■■□□ 2.38
Rbm28Q8CGC6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.93■■■□□ 2.38
Rbm28Q8CGC6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.93■■■□□ 2.38
Rbm28Q8CGC6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rbm28Q8CGC6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Rbm28Q8CGC6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rbm28Q8CGC6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Rbm28Q8CGC6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.9■■■□□ 2.38
Rbm28Q8CGC6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.89■■■□□ 2.38
Rbm28Q8CGC6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
Rbm28Q8CGC6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rbm28Q8CGC6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rbm28Q8CGC6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rbm28Q8CGC6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.86■■■□□ 2.37
Rbm28Q8CGC6 Gm24970-201ENSMUST00000175582 82 ntBASIC29.85■■■□□ 2.37
Rbm28Q8CGC6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rbm28Q8CGC6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rbm28Q8CGC6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rbm28Q8CGC6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.84■■■□□ 2.37
Rbm28Q8CGC6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Rbm28Q8CGC6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rbm28Q8CGC6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Rbm28Q8CGC6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Rbm28Q8CGC6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
Rbm28Q8CGC6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Rbm28Q8CGC6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Rbm28Q8CGC6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Rbm28Q8CGC6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
Rbm28Q8CGC6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.77■■■□□ 2.36
Rbm28Q8CGC6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Rbm28Q8CGC6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.75■■■□□ 2.35
Rbm28Q8CGC6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rbm28Q8CGC6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Rbm28Q8CGC6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Rbm28Q8CGC6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rbm28Q8CGC6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rbm28Q8CGC6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Rbm28Q8CGC6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rbm28Q8CGC6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Rbm28Q8CGC6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rbm28Q8CGC6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.67■■■□□ 2.34
Rbm28Q8CGC6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Rbm28Q8CGC6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Rbm28Q8CGC6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rbm28Q8CGC6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Rbm28Q8CGC6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rbm28Q8CGC6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rbm28Q8CGC6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rbm28Q8CGC6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rbm28Q8CGC6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Rbm28Q8CGC6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.62■■■□□ 2.33
Rbm28Q8CGC6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rbm28Q8CGC6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rbm28Q8CGC6 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.58■■■□□ 2.33
Rbm28Q8CGC6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rbm28Q8CGC6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rbm28Q8CGC6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rbm28Q8CGC6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Rbm28Q8CGC6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Rbm28Q8CGC6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Rbm28Q8CGC6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rbm28Q8CGC6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rbm28Q8CGC6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rbm28Q8CGC6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.51■■■□□ 2.31
Rbm28Q8CGC6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rbm28Q8CGC6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Rbm28Q8CGC6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
Rbm28Q8CGC6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rbm28Q8CGC6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rbm28Q8CGC6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.46■■■□□ 2.31
Rbm28Q8CGC6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rbm28Q8CGC6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.45■■■□□ 2.3
Rbm28Q8CGC6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
Rbm28Q8CGC6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Rbm28Q8CGC6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rbm28Q8CGC6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rbm28Q8CGC6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Rbm28Q8CGC6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Rbm28Q8CGC6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rbm28Q8CGC6 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.39■■■□□ 2.3
Rbm28Q8CGC6 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.39■■■□□ 2.3
Rbm28Q8CGC6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms