Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Smc5Q8CG46 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
Smc5Q8CG46 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Smc5Q8CG46 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Smc5Q8CG46 Amer2-203ENSMUST00000225247 2662 ntBASIC31.72■■■□□ 2.67
Smc5Q8CG46 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.72■■■□□ 2.67
Smc5Q8CG46 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Smc5Q8CG46 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Smc5Q8CG46 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
Smc5Q8CG46 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Smc5Q8CG46 Gm27322-201ENSMUST00000184007 104 ntBASIC31.69■■■□□ 2.66
Smc5Q8CG46 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Smc5Q8CG46 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Smc5Q8CG46 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.67■■■□□ 2.66
Smc5Q8CG46 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Smc5Q8CG46 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Smc5Q8CG46 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Smc5Q8CG46 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Smc5Q8CG46 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Smc5Q8CG46 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
Smc5Q8CG46 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Smc5Q8CG46 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Smc5Q8CG46 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Smc5Q8CG46 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Smc5Q8CG46 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.58■■■□□ 2.65
Smc5Q8CG46 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Smc5Q8CG46 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.57■■■□□ 2.64
Smc5Q8CG46 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Smc5Q8CG46 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smc5Q8CG46 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smc5Q8CG46 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.54■■■□□ 2.64
Smc5Q8CG46 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
Smc5Q8CG46 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
Smc5Q8CG46 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Smc5Q8CG46 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.53■■■□□ 2.64
Smc5Q8CG46 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Smc5Q8CG46 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Smc5Q8CG46 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smc5Q8CG46 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.49■■■□□ 2.63
Smc5Q8CG46 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Smc5Q8CG46 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.48■■■□□ 2.63
Smc5Q8CG46 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smc5Q8CG46 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.46■■■□□ 2.63
Smc5Q8CG46 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.46■■■□□ 2.63
Smc5Q8CG46 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Smc5Q8CG46 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smc5Q8CG46 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smc5Q8CG46 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Smc5Q8CG46 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smc5Q8CG46 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.41■■■□□ 2.62
Smc5Q8CG46 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smc5Q8CG46 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smc5Q8CG46 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smc5Q8CG46 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smc5Q8CG46 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smc5Q8CG46 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smc5Q8CG46 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.35■■■□□ 2.61
Smc5Q8CG46 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.35■■■□□ 2.61
Smc5Q8CG46 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smc5Q8CG46 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Smc5Q8CG46 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
Smc5Q8CG46 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.32■■■□□ 2.6
Smc5Q8CG46 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.32■■■□□ 2.6
Smc5Q8CG46 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Smc5Q8CG46 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Smc5Q8CG46 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.3■■■□□ 2.6
Smc5Q8CG46 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Smc5Q8CG46 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Smc5Q8CG46 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Smc5Q8CG46 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
Smc5Q8CG46 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Smc5Q8CG46 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smc5Q8CG46 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Smc5Q8CG46 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Smc5Q8CG46 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Smc5Q8CG46 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Smc5Q8CG46 Peli2-204ENSMUST00000226513 1320 ntBASIC31.2■■■□□ 2.58
Smc5Q8CG46 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Smc5Q8CG46 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Smc5Q8CG46 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Smc5Q8CG46 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Smc5Q8CG46 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Smc5Q8CG46 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.16■■■□□ 2.58
Smc5Q8CG46 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Smc5Q8CG46 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Smc5Q8CG46 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Smc5Q8CG46 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Smc5Q8CG46 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.57
Smc5Q8CG46 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Smc5Q8CG46 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Smc5Q8CG46 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Smc5Q8CG46 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Smc5Q8CG46 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Smc5Q8CG46 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Smc5Q8CG46 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Smc5Q8CG46 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Smc5Q8CG46 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Smc5Q8CG46 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.09■■■□□ 2.57
Smc5Q8CG46 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Smc5Q8CG46 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms