Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Cabcoco1Q8CDT7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cabcoco1Q8CDT7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cabcoco1Q8CDT7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cabcoco1Q8CDT7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cabcoco1Q8CDT7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Cabcoco1Q8CDT7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Cabcoco1Q8CDT7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cabcoco1Q8CDT7 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.54■■□□□ 1.52
Cabcoco1Q8CDT7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cabcoco1Q8CDT7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Cabcoco1Q8CDT7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cabcoco1Q8CDT7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cabcoco1Q8CDT7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cabcoco1Q8CDT7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cabcoco1Q8CDT7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
Cabcoco1Q8CDT7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cabcoco1Q8CDT7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cabcoco1Q8CDT7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cabcoco1Q8CDT7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cabcoco1Q8CDT7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cabcoco1Q8CDT7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cabcoco1Q8CDT7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cabcoco1Q8CDT7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cabcoco1Q8CDT7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Cabcoco1Q8CDT7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.42■■□□□ 1.5
Cabcoco1Q8CDT7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Cabcoco1Q8CDT7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cabcoco1Q8CDT7 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.41■■□□□ 1.5
Cabcoco1Q8CDT7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cabcoco1Q8CDT7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Cabcoco1Q8CDT7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cabcoco1Q8CDT7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.39■■□□□ 1.5
Cabcoco1Q8CDT7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cabcoco1Q8CDT7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cabcoco1Q8CDT7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cabcoco1Q8CDT7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.37■■□□□ 1.49
Cabcoco1Q8CDT7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Cabcoco1Q8CDT7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cabcoco1Q8CDT7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.37■■□□□ 1.49
Cabcoco1Q8CDT7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cabcoco1Q8CDT7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cabcoco1Q8CDT7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cabcoco1Q8CDT7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cabcoco1Q8CDT7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cabcoco1Q8CDT7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cabcoco1Q8CDT7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cabcoco1Q8CDT7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.35■■□□□ 1.49
Cabcoco1Q8CDT7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Cabcoco1Q8CDT7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cabcoco1Q8CDT7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cabcoco1Q8CDT7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cabcoco1Q8CDT7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cabcoco1Q8CDT7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cabcoco1Q8CDT7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cabcoco1Q8CDT7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Cabcoco1Q8CDT7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cabcoco1Q8CDT7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cabcoco1Q8CDT7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.27■■□□□ 1.48
Cabcoco1Q8CDT7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.27■■□□□ 1.48
Cabcoco1Q8CDT7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.27■■□□□ 1.48
Cabcoco1Q8CDT7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cabcoco1Q8CDT7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cabcoco1Q8CDT7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cabcoco1Q8CDT7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cabcoco1Q8CDT7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cabcoco1Q8CDT7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cabcoco1Q8CDT7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cabcoco1Q8CDT7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cabcoco1Q8CDT7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.25■■□□□ 1.47
Cabcoco1Q8CDT7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cabcoco1Q8CDT7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cabcoco1Q8CDT7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cabcoco1Q8CDT7 Gm25262-201ENSMUST00000174934 133 ntBASIC24.24■■□□□ 1.47
Cabcoco1Q8CDT7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cabcoco1Q8CDT7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
Cabcoco1Q8CDT7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cabcoco1Q8CDT7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Cabcoco1Q8CDT7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cabcoco1Q8CDT7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cabcoco1Q8CDT7 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.22■■□□□ 1.47
Cabcoco1Q8CDT7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cabcoco1Q8CDT7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.47
Cabcoco1Q8CDT7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cabcoco1Q8CDT7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cabcoco1Q8CDT7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cabcoco1Q8CDT7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.19■■□□□ 1.46
Cabcoco1Q8CDT7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cabcoco1Q8CDT7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cabcoco1Q8CDT7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Cabcoco1Q8CDT7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cabcoco1Q8CDT7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cabcoco1Q8CDT7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cabcoco1Q8CDT7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cabcoco1Q8CDT7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cabcoco1Q8CDT7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cabcoco1Q8CDT7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cabcoco1Q8CDT7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.13■■□□□ 1.45
Cabcoco1Q8CDT7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.13■■□□□ 1.45
Cabcoco1Q8CDT7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms