Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Shisa4Q8CA71 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Shisa4Q8CA71 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Shisa4Q8CA71 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
Shisa4Q8CA71 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Shisa4Q8CA71 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.17■■■□□ 2.42
Shisa4Q8CA71 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Shisa4Q8CA71 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Shisa4Q8CA71 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Shisa4Q8CA71 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.16■■■□□ 2.42
Shisa4Q8CA71 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
Shisa4Q8CA71 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
Shisa4Q8CA71 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Shisa4Q8CA71 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Shisa4Q8CA71 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Shisa4Q8CA71 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Shisa4Q8CA71 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.12■■■□□ 2.41
Shisa4Q8CA71 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.11■■■□□ 2.41
Shisa4Q8CA71 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Shisa4Q8CA71 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.1■■■□□ 2.41
Shisa4Q8CA71 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Shisa4Q8CA71 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shisa4Q8CA71 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.08■■■□□ 2.41
Shisa4Q8CA71 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shisa4Q8CA71 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Shisa4Q8CA71 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Shisa4Q8CA71 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Shisa4Q8CA71 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Shisa4Q8CA71 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shisa4Q8CA71 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
Shisa4Q8CA71 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Shisa4Q8CA71 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Shisa4Q8CA71 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30■■■□□ 2.39
Shisa4Q8CA71 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Shisa4Q8CA71 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.99■■■□□ 2.39
Shisa4Q8CA71 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.99■■■□□ 2.39
Shisa4Q8CA71 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Shisa4Q8CA71 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Shisa4Q8CA71 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.96■■■□□ 2.39
Shisa4Q8CA71 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Shisa4Q8CA71 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Shisa4Q8CA71 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Shisa4Q8CA71 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Shisa4Q8CA71 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shisa4Q8CA71 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.91■■■□□ 2.38
Shisa4Q8CA71 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shisa4Q8CA71 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Shisa4Q8CA71 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Shisa4Q8CA71 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Shisa4Q8CA71 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Shisa4Q8CA71 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Shisa4Q8CA71 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Shisa4Q8CA71 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Shisa4Q8CA71 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Shisa4Q8CA71 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Shisa4Q8CA71 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.37
Shisa4Q8CA71 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Shisa4Q8CA71 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Shisa4Q8CA71 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Shisa4Q8CA71 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Shisa4Q8CA71 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.78■■■□□ 2.36
Shisa4Q8CA71 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.78■■■□□ 2.36
Shisa4Q8CA71 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
Shisa4Q8CA71 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.77■■■□□ 2.36
Shisa4Q8CA71 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Shisa4Q8CA71 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Shisa4Q8CA71 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.75■■■□□ 2.35
Shisa4Q8CA71 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
Shisa4Q8CA71 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shisa4Q8CA71 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Shisa4Q8CA71 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shisa4Q8CA71 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.71■■■□□ 2.35
Shisa4Q8CA71 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Shisa4Q8CA71 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Shisa4Q8CA71 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Shisa4Q8CA71 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Shisa4Q8CA71 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.68■■■□□ 2.34
Shisa4Q8CA71 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Shisa4Q8CA71 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Shisa4Q8CA71 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.66■■■□□ 2.34
Shisa4Q8CA71 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.66■■■□□ 2.34
Shisa4Q8CA71 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Shisa4Q8CA71 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
Shisa4Q8CA71 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Shisa4Q8CA71 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Shisa4Q8CA71 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
Shisa4Q8CA71 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Shisa4Q8CA71 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.62■■■□□ 2.33
Shisa4Q8CA71 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Shisa4Q8CA71 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Shisa4Q8CA71 Gm9397-201ENSMUST00000200125 605 ntBASIC29.62■■■□□ 2.33
Shisa4Q8CA71 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Shisa4Q8CA71 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Shisa4Q8CA71 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Shisa4Q8CA71 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.59■■■□□ 2.33
Shisa4Q8CA71 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Shisa4Q8CA71 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.57■■■□□ 2.32
Shisa4Q8CA71 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Shisa4Q8CA71 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Shisa4Q8CA71 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms