Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Slc46a2Q8CA03 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Slc46a2Q8CA03 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.36■■□□□ 1.49
Slc46a2Q8CA03 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.36■■□□□ 1.49
Slc46a2Q8CA03 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Slc46a2Q8CA03 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Slc46a2Q8CA03 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc46a2Q8CA03 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Slc46a2Q8CA03 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Slc46a2Q8CA03 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Slc46a2Q8CA03 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Slc46a2Q8CA03 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Slc46a2Q8CA03 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.3■■□□□ 1.48
Slc46a2Q8CA03 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.29■■□□□ 1.48
Slc46a2Q8CA03 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Slc46a2Q8CA03 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Slc46a2Q8CA03 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Slc46a2Q8CA03 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Slc46a2Q8CA03 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Slc46a2Q8CA03 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Slc46a2Q8CA03 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc46a2Q8CA03 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.22■■□□□ 1.47
Slc46a2Q8CA03 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc46a2Q8CA03 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc46a2Q8CA03 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc46a2Q8CA03 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Slc46a2Q8CA03 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Slc46a2Q8CA03 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Slc46a2Q8CA03 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc46a2Q8CA03 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Slc46a2Q8CA03 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.17■■□□□ 1.46
Slc46a2Q8CA03 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Slc46a2Q8CA03 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.17■■□□□ 1.46
Slc46a2Q8CA03 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Slc46a2Q8CA03 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Slc46a2Q8CA03 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Slc46a2Q8CA03 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Slc46a2Q8CA03 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.15■■□□□ 1.46
Slc46a2Q8CA03 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Slc46a2Q8CA03 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Slc46a2Q8CA03 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.13■■□□□ 1.45
Slc46a2Q8CA03 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.12■■□□□ 1.45
Slc46a2Q8CA03 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.11■■□□□ 1.45
Slc46a2Q8CA03 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Slc46a2Q8CA03 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.1■■□□□ 1.45
Slc46a2Q8CA03 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.1■■□□□ 1.45
Slc46a2Q8CA03 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
Slc46a2Q8CA03 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Slc46a2Q8CA03 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Slc46a2Q8CA03 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Slc46a2Q8CA03 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Slc46a2Q8CA03 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Slc46a2Q8CA03 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.09■■□□□ 1.45
Slc46a2Q8CA03 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Slc46a2Q8CA03 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc46a2Q8CA03 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc46a2Q8CA03 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Slc46a2Q8CA03 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Slc46a2Q8CA03 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Slc46a2Q8CA03 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Slc46a2Q8CA03 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Slc46a2Q8CA03 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.05■■□□□ 1.44
Slc46a2Q8CA03 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Slc46a2Q8CA03 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Slc46a2Q8CA03 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Slc46a2Q8CA03 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Slc46a2Q8CA03 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Slc46a2Q8CA03 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.01■■□□□ 1.43
Slc46a2Q8CA03 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Slc46a2Q8CA03 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Slc46a2Q8CA03 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Slc46a2Q8CA03 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Slc46a2Q8CA03 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Slc46a2Q8CA03 Gm26115-201ENSMUST00000175605 87 ntBASIC23.99■■□□□ 1.43
Slc46a2Q8CA03 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.99■■□□□ 1.43
Slc46a2Q8CA03 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Slc46a2Q8CA03 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Slc46a2Q8CA03 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Slc46a2Q8CA03 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Slc46a2Q8CA03 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Slc46a2Q8CA03 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Slc46a2Q8CA03 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Slc46a2Q8CA03 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Slc46a2Q8CA03 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Slc46a2Q8CA03 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Slc46a2Q8CA03 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Slc46a2Q8CA03 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Slc46a2Q8CA03 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Slc46a2Q8CA03 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Slc46a2Q8CA03 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Slc46a2Q8CA03 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Slc46a2Q8CA03 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Slc46a2Q8CA03 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Slc46a2Q8CA03 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc46a2Q8CA03 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.87■■□□□ 1.41
Slc46a2Q8CA03 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Slc46a2Q8CA03 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Slc46a2Q8CA03 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Slc46a2Q8CA03 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.85■■□□□ 1.41
Slc46a2Q8CA03 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms