Protein–RNA interactions for Protein: Q8C1C8

Pnma1, Paraneoplastic antigen Ma1 homolog, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnma1Q8C1C8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pnma1Q8C1C8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pnma1Q8C1C8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pnma1Q8C1C8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pnma1Q8C1C8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Pnma1Q8C1C8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pnma1Q8C1C8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pnma1Q8C1C8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pnma1Q8C1C8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pnma1Q8C1C8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Pnma1Q8C1C8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pnma1Q8C1C8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pnma1Q8C1C8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pnma1Q8C1C8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Pnma1Q8C1C8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pnma1Q8C1C8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pnma1Q8C1C8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Pnma1Q8C1C8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pnma1Q8C1C8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pnma1Q8C1C8 Gm45855-201ENSMUST00000212546 880 ntBASIC28.14■■■□□ 2.1
Pnma1Q8C1C8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pnma1Q8C1C8 Gm9397-201ENSMUST00000200125 605 ntBASIC28.13■■■□□ 2.09
Pnma1Q8C1C8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pnma1Q8C1C8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pnma1Q8C1C8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pnma1Q8C1C8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pnma1Q8C1C8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pnma1Q8C1C8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.1■■■□□ 2.09
Pnma1Q8C1C8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pnma1Q8C1C8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.1■■■□□ 2.09
Pnma1Q8C1C8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.09■■■□□ 2.09
Pnma1Q8C1C8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.08■■■□□ 2.09
Pnma1Q8C1C8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pnma1Q8C1C8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Pnma1Q8C1C8 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.07■■■□□ 2.08
Pnma1Q8C1C8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Pnma1Q8C1C8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.07■■■□□ 2.08
Pnma1Q8C1C8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pnma1Q8C1C8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pnma1Q8C1C8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.04■■■□□ 2.08
Pnma1Q8C1C8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pnma1Q8C1C8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Pnma1Q8C1C8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.01■■■□□ 2.07
Pnma1Q8C1C8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Pnma1Q8C1C8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28■■■□□ 2.07
Pnma1Q8C1C8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pnma1Q8C1C8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.98■■■□□ 2.07
Pnma1Q8C1C8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Pnma1Q8C1C8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Pnma1Q8C1C8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
Pnma1Q8C1C8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pnma1Q8C1C8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Pnma1Q8C1C8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.94■■■□□ 2.06
Pnma1Q8C1C8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pnma1Q8C1C8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pnma1Q8C1C8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Pnma1Q8C1C8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pnma1Q8C1C8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pnma1Q8C1C8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pnma1Q8C1C8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.91■■■□□ 2.06
Pnma1Q8C1C8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.91■■■□□ 2.06
Pnma1Q8C1C8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pnma1Q8C1C8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Pnma1Q8C1C8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pnma1Q8C1C8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.89■■■□□ 2.06
Pnma1Q8C1C8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Pnma1Q8C1C8 Gm24970-201ENSMUST00000175582 82 ntBASIC27.89■■■□□ 2.06
Pnma1Q8C1C8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Pnma1Q8C1C8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
Pnma1Q8C1C8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
Pnma1Q8C1C8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pnma1Q8C1C8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.87■■■□□ 2.05
Pnma1Q8C1C8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pnma1Q8C1C8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pnma1Q8C1C8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.85■■■□□ 2.05
Pnma1Q8C1C8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pnma1Q8C1C8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pnma1Q8C1C8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
Pnma1Q8C1C8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.83■■■□□ 2.05
Pnma1Q8C1C8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Pnma1Q8C1C8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Pnma1Q8C1C8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pnma1Q8C1C8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pnma1Q8C1C8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.78■■■□□ 2.04
Pnma1Q8C1C8 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.78■■■□□ 2.04
Pnma1Q8C1C8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Pnma1Q8C1C8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.78■■■□□ 2.04
Pnma1Q8C1C8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Pnma1Q8C1C8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Pnma1Q8C1C8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Pnma1Q8C1C8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Pnma1Q8C1C8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pnma1Q8C1C8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pnma1Q8C1C8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pnma1Q8C1C8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.73■■■□□ 2.03
Pnma1Q8C1C8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pnma1Q8C1C8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pnma1Q8C1C8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Pnma1Q8C1C8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pnma1Q8C1C8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms