Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Sh3rf3Q8C120 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sh3rf3Q8C120 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sh3rf3Q8C120 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3rf3Q8C120 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3rf3Q8C120 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Sh3rf3Q8C120 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Sh3rf3Q8C120 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sh3rf3Q8C120 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3rf3Q8C120 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Sh3rf3Q8C120 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Sh3rf3Q8C120 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sh3rf3Q8C120 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sh3rf3Q8C120 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sh3rf3Q8C120 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Sh3rf3Q8C120 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Sh3rf3Q8C120 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sh3rf3Q8C120 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Sh3rf3Q8C120 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.3■■□□□ 1.8
Sh3rf3Q8C120 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sh3rf3Q8C120 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sh3rf3Q8C120 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.27■■□□□ 1.8
Sh3rf3Q8C120 Gm16148-201ENSMUST00000119653 893 ntBASIC26.26■■□□□ 1.79
Sh3rf3Q8C120 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sh3rf3Q8C120 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Sh3rf3Q8C120 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3rf3Q8C120 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.22■■□□□ 1.79
Sh3rf3Q8C120 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Sh3rf3Q8C120 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sh3rf3Q8C120 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Sh3rf3Q8C120 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Sh3rf3Q8C120 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Sh3rf3Q8C120 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Sh3rf3Q8C120 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sh3rf3Q8C120 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Sh3rf3Q8C120 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Sh3rf3Q8C120 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Sh3rf3Q8C120 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sh3rf3Q8C120 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh3rf3Q8C120 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.13■■□□□ 1.77
Sh3rf3Q8C120 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Sh3rf3Q8C120 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Sh3rf3Q8C120 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Sh3rf3Q8C120 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.11■■□□□ 1.77
Sh3rf3Q8C120 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Sh3rf3Q8C120 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sh3rf3Q8C120 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sh3rf3Q8C120 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sh3rf3Q8C120 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Sh3rf3Q8C120 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
Sh3rf3Q8C120 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3rf3Q8C120 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Sh3rf3Q8C120 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.02■■□□□ 1.76
Sh3rf3Q8C120 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Sh3rf3Q8C120 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Sh3rf3Q8C120 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sh3rf3Q8C120 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sh3rf3Q8C120 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sh3rf3Q8C120 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3rf3Q8C120 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
Sh3rf3Q8C120 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3rf3Q8C120 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3rf3Q8C120 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sh3rf3Q8C120 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.96■■□□□ 1.75
Sh3rf3Q8C120 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Sh3rf3Q8C120 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sh3rf3Q8C120 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sh3rf3Q8C120 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Sh3rf3Q8C120 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sh3rf3Q8C120 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Sh3rf3Q8C120 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.89■■□□□ 1.74
Sh3rf3Q8C120 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms