Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.19■■□□□ 1.78
Sh3rf2Q8BZT2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sh3rf2Q8BZT2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sh3rf2Q8BZT2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sh3rf2Q8BZT2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.17■■□□□ 1.78
Sh3rf2Q8BZT2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sh3rf2Q8BZT2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sh3rf2Q8BZT2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sh3rf2Q8BZT2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sh3rf2Q8BZT2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.13■■□□□ 1.77
Sh3rf2Q8BZT2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.13■■□□□ 1.77
Sh3rf2Q8BZT2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
Sh3rf2Q8BZT2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sh3rf2Q8BZT2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sh3rf2Q8BZT2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.09■■□□□ 1.77
Sh3rf2Q8BZT2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Sh3rf2Q8BZT2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.08■■□□□ 1.77
Sh3rf2Q8BZT2 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.08■■□□□ 1.77
Sh3rf2Q8BZT2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sh3rf2Q8BZT2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Sh3rf2Q8BZT2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.07■■□□□ 1.76
Sh3rf2Q8BZT2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sh3rf2Q8BZT2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf2Q8BZT2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf2Q8BZT2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Sh3rf2Q8BZT2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf2Q8BZT2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf2Q8BZT2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.05■■□□□ 1.76
Sh3rf2Q8BZT2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh3rf2Q8BZT2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Sh3rf2Q8BZT2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh3rf2Q8BZT2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Sh3rf2Q8BZT2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Sh3rf2Q8BZT2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3rf2Q8BZT2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3rf2Q8BZT2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sh3rf2Q8BZT2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Sh3rf2Q8BZT2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sh3rf2Q8BZT2 Gm24970-201ENSMUST00000175582 82 ntBASIC26.02■■□□□ 1.76
Sh3rf2Q8BZT2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sh3rf2Q8BZT2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Sh3rf2Q8BZT2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sh3rf2Q8BZT2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.98■■□□□ 1.75
Sh3rf2Q8BZT2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3rf2Q8BZT2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3rf2Q8BZT2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sh3rf2Q8BZT2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sh3rf2Q8BZT2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf2Q8BZT2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf2Q8BZT2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf2Q8BZT2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf2Q8BZT2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Sh3rf2Q8BZT2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sh3rf2Q8BZT2 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.89■■□□□ 1.74
Sh3rf2Q8BZT2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.89■■□□□ 1.74
Sh3rf2Q8BZT2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sh3rf2Q8BZT2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sh3rf2Q8BZT2 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.85■■□□□ 1.73
Sh3rf2Q8BZT2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Sh3rf2Q8BZT2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Sh3rf2Q8BZT2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3rf2Q8BZT2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.82■■□□□ 1.72
Sh3rf2Q8BZT2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Sh3rf2Q8BZT2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
Sh3rf2Q8BZT2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sh3rf2Q8BZT2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
Sh3rf2Q8BZT2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sh3rf2Q8BZT2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Sh3rf2Q8BZT2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Sh3rf2Q8BZT2 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.74■■□□□ 1.71
Sh3rf2Q8BZT2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sh3rf2Q8BZT2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sh3rf2Q8BZT2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.73■■□□□ 1.71
Sh3rf2Q8BZT2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Sh3rf2Q8BZT2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sh3rf2Q8BZT2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.72■■□□□ 1.71
Sh3rf2Q8BZT2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3rf2Q8BZT2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sh3rf2Q8BZT2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Sh3rf2Q8BZT2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Sh3rf2Q8BZT2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Sh3rf2Q8BZT2 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.67■■□□□ 1.7
Sh3rf2Q8BZT2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3rf2Q8BZT2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.66■■□□□ 1.7
Sh3rf2Q8BZT2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3rf2Q8BZT2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.65■■□□□ 1.7
Sh3rf2Q8BZT2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Sh3rf2Q8BZT2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3rf2Q8BZT2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3rf2Q8BZT2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sh3rf2Q8BZT2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Sh3rf2Q8BZT2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Sh3rf2Q8BZT2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3rf2Q8BZT2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3rf2Q8BZT2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.59■■□□□ 1.69
Sh3rf2Q8BZT2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sh3rf2Q8BZT2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sh3rf2Q8BZT2 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.57■■□□□ 1.68
Sh3rf2Q8BZT2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sh3rf2Q8BZT2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms