Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC37.76■■■■□ 3.64
Rsph4aQ8BYM7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
Rsph4aQ8BYM7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.63
Rsph4aQ8BYM7 Gm43863-201ENSMUST00000203822 1192 ntBASIC37.73■■■■□ 3.63
Rsph4aQ8BYM7 Gm6821-201ENSMUST00000107540 542 ntBASIC37.71■■■■□ 3.63
Rsph4aQ8BYM7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC37.7■■■■□ 3.63
Rsph4aQ8BYM7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC37.7■■■■□ 3.63
Rsph4aQ8BYM7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Rsph4aQ8BYM7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Rsph4aQ8BYM7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Rsph4aQ8BYM7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC37.6■■■■□ 3.61
Rsph4aQ8BYM7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC37.6■■■■□ 3.61
Rsph4aQ8BYM7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Rsph4aQ8BYM7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Rsph4aQ8BYM7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Rsph4aQ8BYM7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Rsph4aQ8BYM7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Rsph4aQ8BYM7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
Rsph4aQ8BYM7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC37.56■■■■□ 3.6
Rsph4aQ8BYM7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Rsph4aQ8BYM7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC37.55■■■■□ 3.6
Rsph4aQ8BYM7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC37.54■■■■□ 3.6
Rsph4aQ8BYM7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
Rsph4aQ8BYM7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Rsph4aQ8BYM7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC37.47■■■■□ 3.59
Rsph4aQ8BYM7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC37.46■■■■□ 3.59
Rsph4aQ8BYM7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Rsph4aQ8BYM7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC37.45■■■■□ 3.59
Rsph4aQ8BYM7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC37.44■■■■□ 3.58
Rsph4aQ8BYM7 AC157572.2-201ENSMUST00000226970 908 ntBASIC37.44■■■■□ 3.58
Rsph4aQ8BYM7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC37.42■■■■□ 3.58
Rsph4aQ8BYM7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC37.41■■■■□ 3.58
Rsph4aQ8BYM7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC37.33■■■■□ 3.57
Rsph4aQ8BYM7 Gm42809-201ENSMUST00000198429 1138 ntBASIC37.32■■■■□ 3.56
Rsph4aQ8BYM7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Rsph4aQ8BYM7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Rsph4aQ8BYM7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC37.29■■■■□ 3.56
Rsph4aQ8BYM7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC37.29■■■■□ 3.56
Rsph4aQ8BYM7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Rsph4aQ8BYM7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
Rsph4aQ8BYM7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC37.25■■■■□ 3.55
Rsph4aQ8BYM7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC37.24■■■■□ 3.55
Rsph4aQ8BYM7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Rsph4aQ8BYM7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC37.22■■■■□ 3.55
Rsph4aQ8BYM7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Rsph4aQ8BYM7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC37.22■■■■□ 3.55
Rsph4aQ8BYM7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Rsph4aQ8BYM7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC37.2■■■■□ 3.55
Rsph4aQ8BYM7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Rsph4aQ8BYM7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Rsph4aQ8BYM7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC37.19■■■■□ 3.54
Rsph4aQ8BYM7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC37.19■■■■□ 3.54
Rsph4aQ8BYM7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC37.16■■■■□ 3.54
Rsph4aQ8BYM7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Rsph4aQ8BYM7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
Rsph4aQ8BYM7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rsph4aQ8BYM7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rsph4aQ8BYM7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Rsph4aQ8BYM7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC37.12■■■■□ 3.53
Rsph4aQ8BYM7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rsph4aQ8BYM7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rsph4aQ8BYM7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Rsph4aQ8BYM7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
Rsph4aQ8BYM7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC37.07■■■■□ 3.53
Rsph4aQ8BYM7 Nkain2-201ENSMUST00000092602 558 ntBASIC37.07■■■■□ 3.52
Rsph4aQ8BYM7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
Rsph4aQ8BYM7 Gm7432-201ENSMUST00000210343 879 ntBASIC37.06■■■■□ 3.52
Rsph4aQ8BYM7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
Rsph4aQ8BYM7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Rsph4aQ8BYM7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.04■■■■□ 3.52
Rsph4aQ8BYM7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Rsph4aQ8BYM7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Rsph4aQ8BYM7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC37.03■■■■□ 3.52
Rsph4aQ8BYM7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC37.02■■■■□ 3.52
Rsph4aQ8BYM7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Rsph4aQ8BYM7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
Rsph4aQ8BYM7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC37.01■■■■□ 3.52
Rsph4aQ8BYM7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC37.01■■■■□ 3.52
Rsph4aQ8BYM7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC37.01■■■■□ 3.52
Rsph4aQ8BYM7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
Rsph4aQ8BYM7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Rsph4aQ8BYM7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC37■■■■□ 3.51
Rsph4aQ8BYM7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC36.99■■■■□ 3.51
Rsph4aQ8BYM7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Rsph4aQ8BYM7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
Rsph4aQ8BYM7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC36.95■■■■□ 3.51
Rsph4aQ8BYM7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Rsph4aQ8BYM7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
Rsph4aQ8BYM7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Rsph4aQ8BYM7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Rsph4aQ8BYM7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.91■■■■□ 3.5
Rsph4aQ8BYM7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC36.9■■■■□ 3.5
Rsph4aQ8BYM7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC36.89■■■■□ 3.5
Rsph4aQ8BYM7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC36.89■■■■□ 3.5
Rsph4aQ8BYM7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC36.89■■■■□ 3.5
Rsph4aQ8BYM7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rsph4aQ8BYM7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rsph4aQ8BYM7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rsph4aQ8BYM7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC36.88■■■■□ 3.49
Rsph4aQ8BYM7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC36.87■■■■□ 3.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms