Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trank1Q8BV79 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.87■■□□□ 1.25
Trank1Q8BV79 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trank1Q8BV79 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Trank1Q8BV79 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trank1Q8BV79 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.86■■□□□ 1.25
Trank1Q8BV79 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trank1Q8BV79 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.85■■□□□ 1.25
Trank1Q8BV79 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trank1Q8BV79 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trank1Q8BV79 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.85■■□□□ 1.25
Trank1Q8BV79 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trank1Q8BV79 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Trank1Q8BV79 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trank1Q8BV79 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Trank1Q8BV79 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.81■■□□□ 1.24
Trank1Q8BV79 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trank1Q8BV79 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Trank1Q8BV79 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.23
Trank1Q8BV79 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Trank1Q8BV79 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trank1Q8BV79 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trank1Q8BV79 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trank1Q8BV79 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trank1Q8BV79 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Trank1Q8BV79 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trank1Q8BV79 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trank1Q8BV79 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trank1Q8BV79 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trank1Q8BV79 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Trank1Q8BV79 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Trank1Q8BV79 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trank1Q8BV79 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
Trank1Q8BV79 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.64■■□□□ 1.21
Trank1Q8BV79 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.63■■□□□ 1.21
Trank1Q8BV79 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Trank1Q8BV79 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trank1Q8BV79 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trank1Q8BV79 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trank1Q8BV79 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.61■■□□□ 1.21
Trank1Q8BV79 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.6■■□□□ 1.21
Trank1Q8BV79 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trank1Q8BV79 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trank1Q8BV79 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
Trank1Q8BV79 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trank1Q8BV79 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trank1Q8BV79 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.56■■□□□ 1.2
Trank1Q8BV79 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.56■■□□□ 1.2
Trank1Q8BV79 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trank1Q8BV79 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trank1Q8BV79 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trank1Q8BV79 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
Trank1Q8BV79 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trank1Q8BV79 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trank1Q8BV79 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.51■■□□□ 1.19
Trank1Q8BV79 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trank1Q8BV79 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trank1Q8BV79 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trank1Q8BV79 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trank1Q8BV79 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trank1Q8BV79 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.49■■□□□ 1.19
Trank1Q8BV79 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trank1Q8BV79 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.48■■□□□ 1.19
Trank1Q8BV79 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Trank1Q8BV79 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trank1Q8BV79 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trank1Q8BV79 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trank1Q8BV79 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trank1Q8BV79 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trank1Q8BV79 Gm7432-201ENSMUST00000210343 879 ntBASIC22.44■■□□□ 1.18
Trank1Q8BV79 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.43■■□□□ 1.18
Trank1Q8BV79 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Trank1Q8BV79 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.43■■□□□ 1.18
Trank1Q8BV79 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trank1Q8BV79 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trank1Q8BV79 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.41■■□□□ 1.18
Trank1Q8BV79 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.4■■□□□ 1.18
Trank1Q8BV79 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Trank1Q8BV79 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trank1Q8BV79 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trank1Q8BV79 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.37■■□□□ 1.17
Trank1Q8BV79 Mir6538-201ENSMUST00000183713 110 ntBASIC22.37■■□□□ 1.17
Trank1Q8BV79 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trank1Q8BV79 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trank1Q8BV79 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trank1Q8BV79 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trank1Q8BV79 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trank1Q8BV79 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trank1Q8BV79 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trank1Q8BV79 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trank1Q8BV79 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
Trank1Q8BV79 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trank1Q8BV79 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trank1Q8BV79 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Trank1Q8BV79 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.33■■□□□ 1.17
Trank1Q8BV79 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trank1Q8BV79 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trank1Q8BV79 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.32■■□□□ 1.16
Trank1Q8BV79 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Trank1Q8BV79 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms